Detailed information NTG0447964

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: STCNRZ760_RS09735
• Genome accession: NZ_CP065482
• Coordinates: 1857273..1858373 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain CNRZ760
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1852273..1863373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ760_RS09710 (STCNRZ760_09650)	pgsA	1852815..1853357 (-)	543	WP_024704275.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
STCNRZ760_RS09715 (STCNRZ760_09655)	-	1853370..1854227 (-)	858	WP_011681760.1	helix-turn-helix domain-containing protein	-
STCNRZ760_RS09720 (STCNRZ760_09660)	-	1854286..1855563 (-)	1278	WP_180481150.1	pitrilysin family protein	-
STCNRZ760_RS09725 (STCNRZ760_09665)	-	1855565..1856815 (-)	1251	WP_180481151.1	pitrilysin family protein	-
STCNRZ760_RS09730 (STCNRZ760_09670)	yaaA	1856893..1857270 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
STCNRZ760_RS09735 (STCNRZ760_09675)	recF	1857273..1858373 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
STCNRZ760_RS09740 (STCNRZ760_09680)	guaB	1858542..1860023 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
STCNRZ760_RS09745 (STCNRZ760_09685)	trpS	1860200..1861222 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
STCNRZ760_RS09750 (STCNRZ760_09690)	-	1861650..1862522 (+)	873	WP_011227628.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=447964 STCNRZ760_RS09735 WP_002947786.1 1857273..1858373(+) (recF) [Streptococcus thermophilus strain CNRZ760]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=447964 STCNRZ760_RS09735 WP_002947786.1 1857273..1858373(+) (recF) [Streptococcus thermophilus strain CNRZ760]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432