Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   CARM_RS04840 Genome accession   NZ_CP053825
Coordinates   933806..934462 (+) Length   218 a.a.
NCBI ID   WP_139425530.1    Uniprot ID   A0A7L5I6Q2
Organism   Campylobacter armoricus strain CCUG 73571     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 928806..939462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CARM_RS04815 (CARM_0950) - 928907..930427 (-) 1521 WP_139425520.1 inorganic phosphate transporter -
  CARM_RS04820 (CARM_0951) pdxA 930463..931572 (-) 1110 WP_139425522.1 4-hydroxythreonine-4-phosphate dehydrogenase -
  CARM_RS04825 (CARM_0952) - 931569..932336 (-) 768 WP_139425524.1 pyridoxine 5'-phosphate synthase -
  CARM_RS04830 (CARM_0953) - 932393..933355 (+) 963 WP_139425526.1 Ppx/GppA family phosphatase -
  CARM_RS04835 (CARM_0954) - 933366..933809 (+) 444 WP_139425528.1 GatB/YqeY domain-containing protein -
  CARM_RS04840 (CARM_0955) CJE1441 933806..934462 (+) 657 WP_139425530.1 DNA/RNA non-specific endonuclease Regulator
  CARM_RS04845 (CARM_0956) - 934533..937487 (+) 2955 WP_176301001.1 filamentous hemagglutinin N-terminal domain-containing protein -
  CARM_RS04850 (CARM_0957) dnaK 937512..939383 (-) 1872 WP_139425990.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 26083.17 Da        Isoelectric Point: 10.0282

>NTDB_id=447924 CARM_RS04840 WP_139425530.1 933806..934462(+) (CJE1441) [Campylobacter armoricus strain CCUG 73571]
MKKFLTLCAIALSSFAYTQYELHPSFKDYFKNCSLLMDKYYYINCYDYNYKGTKAIAYKLKASILNQGHIKKRPKFSEDT
NIPKKYRTYWEDYLRSGYTRGHVVPNQSMNATPQAQLSTFLMSNITPQKKDINAEIWNKIEQRERYLAKKNKELEVLNLV
LYDEKPKRIKNNIAIPSFYVKILKAKNYAECYKVPNNDNFARFDRNYFKENCKKYIKF

Nucleotide


Download         Length: 657 bp        

>NTDB_id=447924 CARM_RS04840 WP_139425530.1 933806..934462(+) (CJE1441) [Campylobacter armoricus strain CCUG 73571]
ATGAAAAAATTTCTAACACTTTGTGCTATAGCTTTAAGCTCTTTTGCTTATACTCAATATGAACTACATCCTAGCTTTAA
AGACTACTTTAAAAATTGTTCTTTACTTATGGATAAATATTATTATATTAATTGTTATGATTATAATTATAAAGGCACTA
AAGCCATAGCTTATAAACTAAAAGCAAGTATTTTAAATCAAGGACACATCAAAAAACGCCCTAAATTTTCAGAAGATACA
AATATACCTAAAAAATACAGAACTTATTGGGAAGATTATCTAAGAAGTGGCTATACAAGAGGGCATGTCGTGCCTAATCA
ATCTATGAATGCAACCCCACAAGCCCAGCTTAGTACTTTTTTAATGAGTAATATCACTCCACAAAAAAAGGATATTAACG
CTGAAATTTGGAATAAAATCGAACAAAGAGAAAGATATTTAGCAAAGAAAAACAAAGAATTAGAGGTGTTAAATTTGGTT
CTTTATGATGAAAAACCAAAACGCATAAAAAACAACATTGCAATACCTAGTTTTTATGTAAAAATACTTAAAGCAAAAAA
CTATGCAGAATGTTATAAAGTCCCAAATAATGATAATTTTGCAAGATTTGATAGAAATTATTTCAAAGAAAATTGCAAAA
AATATATTAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(36-209)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L5I6Q2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

61.692

92.202

0.569
  CJE0566 Campylobacter jejuni RM1221

59.701

92.202

0.55