Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   STCNRZ760_RS06405 Genome accession   NZ_CP065482
Coordinates   1219073..1219276 (-) Length   67 a.a.
NCBI ID   WP_224103626.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ760     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1214073..1224276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ760_RS06370 (STCNRZ760_06320) - 1214173..1215267 (-) 1095 WP_180481031.1 sensor histidine kinase -
  STCNRZ760_RS06375 (STCNRZ760_06325) - 1215260..1215997 (-) 738 WP_011227347.1 ABC transporter permease -
  STCNRZ760_RS06380 (STCNRZ760_06330) - 1215994..1216875 (-) 882 WP_180481033.1 ABC transporter ATP-binding protein -
  STCNRZ760_RS06385 (STCNRZ760_06335) - 1216868..1217047 (-) 180 WP_087010021.1 hypothetical protein -
  STCNRZ760_RS06390 (STCNRZ760_06340) - 1217058..1217267 (-) 210 WP_011227348.1 hypothetical protein -
  STCNRZ760_RS06395 (STCNRZ760_06345) - 1217419..1218357 (-) 939 WP_180481035.1 bile acid:sodium symporter family protein -
  STCNRZ760_RS06400 (STCNRZ760_06350) - 1218500..1218949 (-) 450 WP_096811543.1 cytidine deaminase -
  STCNRZ760_RS06405 comA/nlmT 1219073..1219276 (-) 204 WP_224103626.1 ABC transporter ATP-binding protein Regulator
  STCNRZ760_RS06410 - 1219755..1220285 (+) 531 WP_224103625.1 hypothetical protein -
  STCNRZ760_RS06415 (STCNRZ760_06365) - 1220289..1220849 (+) 561 WP_173940410.1 hypothetical protein -
  STCNRZ760_RS06420 (STCNRZ760_06370) - 1221484..1221930 (-) 447 WP_173940411.1 GNAT family N-acetyltransferase -
  STCNRZ760_RS06425 (STCNRZ760_06375) - 1221945..1222673 (-) 729 Protein_1212 helicase-related protein -
  STCNRZ760_RS06430 (STCNRZ760_06380) - 1222768..1223208 (-) 441 WP_176243261.1 ASCH domain-containing protein -
  STCNRZ760_RS06435 - 1223220..1223465 (-) 246 WP_224103624.1 hypothetical protein -

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 7756.99 Da        Isoelectric Point: 4.1469

>NTDB_id=447915 STCNRZ760_RS06405 WP_224103626.1 1219073..1219276(-) (comA/nlmT) [Streptococcus thermophilus strain CNRZ760]
MARALLMKTDILFLDEFSSGIDLETLSKIENRLLQTSKLIIYITHVDTDRIIQQFDEIIDLNGFVDL

Nucleotide


Download         Length: 204 bp        

>NTDB_id=447915 STCNRZ760_RS06405 WP_224103626.1 1219073..1219276(-) (comA/nlmT) [Streptococcus thermophilus strain CNRZ760]
TTGGCAAGAGCCTTATTGATGAAGACGGATATCTTATTTTTAGACGAATTTTCTTCTGGTATTGACCTTGAAACGTTATC
AAAAATAGAGAATCGACTTTTACAAACGAGTAAATTAATTATTTACATCACACATGTAGACACCGATAGAATTATCCAAC
AATTTGATGAAATAATAGATTTGAATGGGTTTGTAGACTTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

45

89.552

0.403
  comA Streptococcus gordonii str. Challis substr. CH1

32.911

100

0.388