Detailed information NTG0447741

Bioinformatically predicted

Overview

• Name: tfoS
• Type: Regulator
• Locus tag: HPY09_RS03985
• Genome accession: NZ_CP053813
• Coordinates: 842514..845858 (+)
• Length: 1114 a.a.
• NCBI ID: WP_175246804.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain W7G
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 837514..850858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPY09_RS03960 (HPY09_03960)	sucC	837635..838801 (+)	1167	WP_001048578.1	ADP-forming succinate--CoA ligase subunit beta	-
HPY09_RS03965 (HPY09_03965)	sucD	838801..839673 (+)	873	WP_000025475.1	succinate--CoA ligase subunit alpha	-
HPY09_RS03970 (HPY09_03970)	znuB	839780..840562 (-)	783	WP_000571528.1	zinc ABC transporter permease subunit ZnuB	-
HPY09_RS03975 (HPY09_03975)	znuC	840555..841343 (-)	789	WP_057551466.1	zinc ABC transporter ATP-binding protein ZnuC	-
HPY09_RS03980 (HPY09_03980)	znuA	841427..842311 (+)	885	WP_000952850.1	zinc ABC transporter substrate-binding protein ZnuA	-
HPY09_RS03985 (HPY09_03985)	tfoS	842514..845858 (+)	3345	WP_175246804.1	AraC family transcriptional regulator	Regulator
HPY09_RS03990 (HPY09_03990)	-	846631..846861 (+)	231	WP_000777870.1	ferrous iron transport protein A	-
HPY09_RS03995 (HPY09_03995)	feoB	846858..849134 (+)	2277	WP_148495116.1	Fe(2+) transporter permease subunit FeoB	-
HPY09_RS04000 (HPY09_04000)	-	849131..849361 (+)	231	WP_000602537.1	FeoC-like transcriptional regulator	-
HPY09_RS04005 (HPY09_04005)	-	849623..850051 (-)	429	WP_033932801.1	HIT domain-containing protein	-

Sequence

Protein

• Length: 1114 a.a.
• Molecular weight: 126499.15 Da
• Isoelectric Point: 6.8528

>NTDB_id=447741 HPY09_RS03985 WP_175246804.1 842514..845858(+) (tfoS) [Vibrio cholerae strain W7G]
MFRTLLYGCLLNILIPSLVLALDKSMSIFYPLPIQEQGKVIVAQNLYLGSDGGIWVHDVHGKVMYFDGQNVLPRRGSVLP
QLSSHIVYANSAFWAFEQHELFRTYPGGERELMLSLTPGTQIIQMGASNGMIWMVDGENFYSYEIRSGRVESLSLHELYQ
LNSASKVVINDAQFLVSKWALATNVGVYLSDEQGFAHVKNSGKHFIQKLYFSHKRRELLVGSKRGALVIDIENKRPPLDR
IGSSHVLSIAETEKEYWIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTDKGIFYYSLFGQQ
FTRYPAQALSNDGSKTPIGKIAALNSDGDYLAITAQGLYNFNFSDELRKHLIYPGKVNDFVIAQEHLWIATEKGLVRYNL
SRRSIDTPNLPLPLLQTAIQHLSLDSDGNLWGTSDYQIWSYSLSEKNYRDYGSEWMVKAFSPSRITLLAAVKDGIVIGTE
HGAYSLLEKQIRFDFSSHRYGEILQVAEDSSGHIWLVGSYGVFQWRKDQPEAVTVELIEENIQPLCIAESKQGMWLISTK
GISYYRNQELTKHFGAPYGLISNEFLSASCAVGEEQDTLSLIIGSHFGVVKTNTEELAVSNLPNIQVTFSQVSVNHTTKL
LGYRMSEPLKIAYGDSISFQFGALPSSRSQSLEYKLNDEQQWQRFDWALLNFDQLLPGKYRLKVRSANPTQRYRTEALFD
FEVLQPWYMTSIALVGYVLSVLGLLALALWWRTRMILAANRKLKAQVELKTSQLRHQSKIVLSNNHQLRKQLQLHHTILG
NVLDNIDASLRHLSSYAKVRAWSEFEAPFNKVKQELAQLHFMHRGDEDESKYHDLHLLIESALKSWQEEYSKALIKLTYS
GEPRFVEVRQFNLDVLFNAVLTDAIKRLYKHQELTIQLEVRNAQAVIVFSDFGAPIQNIDKTMVTLSGSSYPLEELVTRS
GGVLHVLALKERNVIELAWPLATLPELETIHKPEEREQAAKVGIDEVEKEWLSKVEKLIELHYSDPNFTTSTAAQALYVS
ERSLQRRFKAATGKTFKESLNEVRLEKACQSLLSGAKIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIEDQEN

Nucleotide

• Length: 3345 bp

>NTDB_id=447741 HPY09_RS03985 WP_175246804.1 842514..845858(+) (tfoS) [Vibrio cholerae strain W7G]
GTGTTTCGCACATTGTTGTATGGCTGCTTGCTCAATATCCTGATCCCATCCTTGGTATTGGCATTAGATAAATCTATGTC
TATTTTCTATCCTTTGCCCATTCAAGAGCAGGGGAAAGTTATTGTTGCGCAAAATCTCTACCTCGGTAGTGATGGGGGGA
TTTGGGTACATGATGTTCATGGCAAAGTGATGTACTTCGATGGACAAAACGTCTTGCCTCGTCGTGGTTCTGTTCTGCCG
CAGTTGTCCAGTCATATTGTTTATGCGAACAGTGCATTTTGGGCTTTTGAGCAACACGAGTTGTTCAGAACCTATCCCGG
GGGAGAAAGAGAGCTGATGTTGAGCTTAACTCCGGGAACGCAGATTATTCAGATGGGAGCCTCAAATGGCATGATCTGGA
TGGTCGATGGGGAAAACTTCTATAGTTATGAGATCCGAAGTGGCCGCGTCGAATCCCTCTCGTTACATGAACTTTATCAG
CTCAATAGTGCCAGCAAGGTCGTGATTAACGATGCGCAGTTTTTAGTCTCTAAATGGGCTTTAGCGACTAATGTTGGGGT
GTATTTATCTGATGAACAAGGTTTTGCCCATGTAAAAAATTCGGGCAAGCACTTTATCCAAAAGCTCTATTTTTCCCATA
AGCGGCGAGAGCTGTTAGTTGGGTCTAAACGTGGCGCGTTAGTCATTGATATTGAAAATAAACGTCCACCACTGGATAGA
ATTGGTTCCTCCCATGTCCTTTCTATTGCGGAAACCGAGAAAGAGTACTGGATCGGTACAGAAGATGGGCTCTTTGTGTA
CTCTTTTATCACCGGGAAAATCGTGCAACTTGAGAGTAACAACCAAGATGGCTATGCCTTACTGGGCAAGAAAATCTACG
CCATGGTGAATGACTTTCAAGGTGGGATGTGGATAGGAACTGACAAGGGGATTTTTTATTACTCCCTATTTGGTCAGCAG
TTTACTCGGTATCCGGCACAAGCGTTATCTAACGACGGAAGTAAAACACCGATCGGTAAAATAGCCGCTCTTAACTCGGA
TGGAGACTATCTGGCGATAACCGCACAAGGCCTGTATAACTTCAATTTTTCAGATGAGCTACGTAAGCATCTTATCTATC
CAGGTAAAGTAAATGATTTTGTGATTGCCCAAGAGCATCTCTGGATCGCGACAGAGAAAGGTCTGGTTCGTTACAATCTC
AGTCGTCGTAGTATTGATACGCCCAATTTACCGCTCCCTTTGCTACAAACGGCTATTCAGCATCTGAGCTTAGATAGTGA
CGGTAACTTATGGGGGACAAGTGATTACCAAATATGGTCATACTCACTCTCTGAAAAAAATTATCGAGATTACGGTTCTG
AATGGATGGTGAAGGCTTTTTCTCCATCACGGATCACTCTGCTTGCCGCAGTAAAAGACGGCATAGTGATTGGGACAGAA
CATGGCGCTTATTCCCTGCTTGAAAAACAGATCCGCTTTGATTTTTCGAGTCATCGCTATGGTGAGATTTTACAAGTTGC
TGAAGATTCTTCAGGCCACATTTGGCTTGTTGGTTCTTATGGGGTTTTTCAGTGGCGTAAAGATCAGCCCGAAGCTGTCA
CTGTCGAGTTAATTGAAGAGAATATACAGCCTTTGTGTATTGCTGAGTCTAAGCAGGGGATGTGGCTTATCTCCACCAAA
GGGATCAGTTATTACCGTAATCAAGAGCTCACTAAGCATTTTGGGGCTCCTTATGGACTGATCAGTAATGAGTTCTTGTC
TGCATCGTGTGCGGTGGGTGAGGAGCAAGATACCTTATCGTTGATCATAGGCTCGCATTTTGGTGTAGTGAAAACCAATA
CAGAAGAATTAGCGGTGTCTAATTTGCCCAATATTCAGGTGACGTTTAGCCAAGTCAGCGTAAATCATACGACCAAGCTT
TTGGGGTATCGTATGTCCGAGCCACTGAAAATTGCTTATGGTGATTCGATCAGCTTTCAGTTTGGTGCTTTACCCTCTTC
ACGCAGCCAATCTTTAGAATACAAACTCAACGATGAACAGCAGTGGCAGCGCTTTGATTGGGCGCTGCTCAATTTTGATC
AACTTTTACCTGGTAAGTATCGTTTGAAAGTCCGTAGCGCTAATCCGACACAGCGATACCGAACTGAGGCCCTGTTTGAT
TTTGAAGTCTTACAGCCTTGGTATATGACCTCCATCGCGCTTGTCGGATATGTGCTGAGCGTGTTGGGGTTATTAGCACT
CGCTTTATGGTGGCGAACAAGAATGATATTGGCAGCTAACCGCAAACTCAAAGCGCAAGTGGAGCTCAAAACCAGTCAGT
TACGTCATCAAAGTAAAATTGTGCTGAGCAACAACCACCAACTTCGAAAGCAACTGCAGCTCCACCATACAATTCTTGGT
AACGTGTTAGACAATATTGATGCTTCATTGCGGCACTTATCTTCCTACGCCAAAGTACGAGCATGGAGTGAATTTGAAGC
ACCGTTCAACAAGGTGAAGCAAGAGTTGGCTCAACTGCATTTTATGCATCGCGGCGATGAGGATGAAAGCAAATATCATG
ATTTGCATCTTTTGATTGAGTCTGCATTGAAGAGTTGGCAGGAAGAGTACAGTAAAGCCTTGATTAAGCTAACTTACAGC
GGTGAACCTCGCTTTGTGGAAGTCCGACAATTCAACCTTGATGTGTTATTTAATGCTGTATTAACGGATGCGATCAAACG
TTTGTATAAGCATCAAGAATTAACCATACAACTTGAAGTGAGAAATGCACAGGCGGTTATCGTGTTTTCTGATTTTGGTG
CCCCAATCCAAAACATAGACAAAACCATGGTGACGTTATCTGGTAGTAGTTATCCGCTTGAAGAGTTAGTCACTCGCAGT
GGTGGTGTATTGCATGTGCTCGCGTTGAAAGAGCGTAATGTGATTGAGTTAGCTTGGCCATTGGCAACCTTACCCGAGTT
AGAAACCATTCATAAACCAGAAGAAAGGGAACAGGCGGCTAAGGTTGGGATCGATGAGGTGGAGAAAGAGTGGCTAAGCA
AAGTCGAGAAACTGATTGAGCTGCATTATAGCGACCCCAATTTCACCACATCCACTGCAGCGCAGGCGCTTTATGTCTCT
GAACGAAGTTTACAGCGTCGCTTTAAAGCCGCGACAGGAAAAACCTTCAAAGAGTCGTTAAATGAGGTTCGCTTAGAAAA
AGCGTGTCAAAGCTTATTGAGTGGGGCGAAAATCGCACAAGTTGCCTTTGATTGCGGATTTAATGATCCCTCTTATTTCA
GTCAGCGTTTCAAACATCATTTTGGATTATCACCAAGCCAATTCATCGAAGATCAAGAAAACTAA

Domains

Predicted by InterproScan.

• Helix-turn-helix domain (HTH_18) (1034-1109)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tfoS	Vibrio cholerae O1 biovar El Tor strain E7946	99.551	100	0.996