Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ST90729_RS02500 Genome accession   NZ_CP065480
Coordinates   465540..466346 (+) Length   268 a.a.
NCBI ID   WP_347116722.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 90729     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 460540..471346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST90729_RS02480 (ST90729_02485) tuf 461589..462785 (+) 1197 WP_002949971.1 elongation factor Tu -
  ST90729_RS02485 (ST90729_02490) tpiA 463034..463792 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  ST90729_RS02490 (ST90729_02495) tmk 464030..464659 (+) 630 WP_347116721.1 dTMP kinase -
  ST90729_RS02495 (ST90729_02500) - 464668..465543 (+) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  ST90729_RS02500 (ST90729_02505) yaaT 465540..466346 (+) 807 WP_347116722.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  ST90729_RS02505 (ST90729_02510) yabA 466333..466653 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  ST90729_RS02510 (ST90729_02515) rsmI 466656..467522 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ST90729_RS02515 (ST90729_02520) - 467660..468895 (+) 1236 WP_022096936.1 ammonium transporter -
  ST90729_RS02520 (ST90729_02525) - 468906..469247 (+) 342 WP_041826978.1 P-II family nitrogen regulator -
  ST90729_RS02525 (ST90729_02530) - 469345..470001 (+) 657 WP_087009737.1 glycoside hydrolase family 73 protein -
  ST90729_RS02530 (ST90729_02535) - 470024..470845 (+) 822 WP_347116826.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29741.18 Da        Isoelectric Point: 4.7010

>NTDB_id=447676 ST90729_RS02500 WP_347116722.1 465540..466346(+) (yaaT) [Streptococcus thermophilus strain 90729]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPDVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVGIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKARYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFDKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=447676 ST90729_RS02500 WP_347116722.1 465540..466346(+) (yaaT) [Streptococcus thermophilus strain 90729]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGATGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTTGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGGCATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTCGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGACAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.199

99.627

0.41