Detailed information NTG0447536

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: HPY16_RS16930
• Genome accession: NZ_CP053803
• Coordinates: 785510..788083 (-)
• Length: 857 a.a.
• NCBI ID: WP_175248526.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain L6G
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 780510..793083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPY16_RS16915 (HPY16_16975)	-	781250..782938 (-)	1689	WP_057558270.1	ABC transporter ATP-binding protein	-
HPY16_RS16920 (HPY16_16980)	-	782931..784583 (-)	1653	WP_175248525.1	ABC transporter ATP-binding protein	-
HPY16_RS16925 (HPY16_16985)	-	784853..785518 (+)	666	WP_000268201.1	flagellar brake protein	-
HPY16_RS16930 (HPY16_16990)	luxQ	785510..788083 (-)	2574	WP_175248526.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
HPY16_RS16935 (HPY16_16995)	luxP	788101..789195 (-)	1095	WP_113628575.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
HPY16_RS16940 (HPY16_17000)	traF	789407..790567 (-)	1161	WP_175248527.1	conjugal transfer protein TraF	-
HPY16_RS16945 (HPY16_17005)	-	790669..790974 (-)	306	WP_088127772.1	GIY-YIG nuclease family protein	-
HPY16_RS16950 (HPY16_17010)	-	790974..791624 (-)	651	WP_175248528.1	YceH family protein	-
HPY16_RS16955 (HPY16_17015)	-	791666..791863 (-)	198	WP_001246073.1	hypothetical protein	-
HPY16_RS16960 (HPY16_17020)	-	792051..792371 (+)	321	WP_001089529.1	DUF496 family protein	-
HPY16_RS16965 (HPY16_17025)	-	792784..793035 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 97087.03 Da
• Isoelectric Point: 6.1688

>NTDB_id=447536 HPY16_RS16930 WP_175248526.1 785510..788083(-) (luxQ) [Vibrio cholerae strain L6G]
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAK
NISLINALVSRDSSRLDAFFSSVDELELSNAPDLRFISSHDNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLVQTSG
DGKPVHLLMRRSSLIETGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLTVDTTPLVSTLKGNEPYSLDYVVHSGK
DVMRDSFIVGQTFLEVENVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALLSMIGVSIASRWWLQKRIQREIETLMNYTHK
LMELDTKIQFAGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTIINAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCHEKGLELVVNSNITTATIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVERPDAPQQLLPAP
DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKYHHGQKNAGLN

Nucleotide

• Length: 2574 bp

>NTDB_id=447536 HPY16_RS16930 WP_175248526.1 785510..788083(-) (luxQ) [Vibrio cholerae strain L6G]
TTGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCATTTATCACCCATGCTGTCGTGGTGGTGATGGG
CGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGTAGCCGTTTGATGGCTCAAGAAGGACAACGCACCTCAG
TTCAAACCTCCAGCTTGATTCAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAAGACAGCACAGCCAAA
AATATCAGTTTAATCAATGCACTTGTCAGCCGAGATTCGAGTCGGTTGGATGCGTTTTTTTCCAGTGTCGATGAACTTGA
ACTCTCTAATGCGCCAGATCTGCGTTTTATCTCCAGTCACGACAACATCTTGTGGGATGATGGCAACGCCTCTTTTTACG
GCATTGCCCAGCAAGAGCTGAATAAGCTTATCCGCAGAGTGGCGATCAGTGGCAATTGGCATTTGGTTCAAACGTCTGGC
GATGGTAAACCCGTGCATTTGTTAATGCGCCGCTCATCACTGATTGAAACAGGAACTGGGCAGGTGGTTGGGTACCTGTA
TGTGGGAATCGTACTCAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTTCTGA
CCGTAGACACCACACCGCTGGTCTCCACTTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGTGGAAAA
GATGTCATGAGGGACAGCTTTATTGTTGGCCAAACCTTCTTAGAAGTAGAAAATGTACCGACCTATCTGTGCGTCTACTC
GATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAATTTCTATTTTTGGATGGCGTTTGCGCTGCTCAGTATGATTG
GTGTTTCCATAGCATCACGCTGGTGGTTACAAAAACGTATTCAGCGAGAAATCGAAACCCTAATGAATTACACCCATAAA
TTGATGGAGCTGGACACCAAGATCCAGTTTGCTGGTTCTAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTCTCACCGACCATGCTTTGGA
ATACCTCTGGTCGGCTGATCCGCATGAATCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTGTTGCCGACCATCATTAATGCGGCACAGGGCAATAATCCGAGTGACGTCACAACCGA
AGTAGATGGTCGTGTGTACCGCTGGAACCTTTCGCCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAAGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAACAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCGGCACGGGTCAGA
GCCGAGTTTTTGGCCAAAATGAGCCACGAATTGCGCACGCCGCTCAATGGTGTGCTCGGCGTTTCCCAACTGCTAAAACG
GACCCCACTCAATGACGAACAGCGCGAACACGTGGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCTGTGTTGAATG
ACATCTTGGATTTCTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGCTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTCATGAAAAAGGTTTGGAACTGGTGGTGAATTCCAATATCACCACCGCTAC
CATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTCGAATTGCAATTAATTGAAGGCGATCCGTTAGCTCAGTTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATACGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAGGCTGAATCGACCACCACTCGAGAGTACGGCGG
AAGTGGTTTAGGCTTAACGATTGTGCACAGCTTAGTGGAAATGCTCAGTGGCCAACTGCACGTCAGCTCCGAGTATGGCA
TCGGTACACGTTTTGAAATTCAGTTACCGATTGAGCTGGTAGAAAGACCGGATGCTCCGCAGCAGTTGTTACCGGCTCCT
GATCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACCAACGCCTTTATTGCTCAAGC
ATTCTGTCGTAAGTATGGCTTAGATGTGAGCTGGGTAACCGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGACT
ACGACTTAGTGCTGATGGATAACCAGTTACCCTATCTGGATGGCGTTGAGACCACGCGCACCATCAAAAAAGTACTGCAC
CTTCCGGTGGTGGTGTATGCCTGTACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTTTTCCATGCGGGCGCGGAATA
TGTATTAGTGAAGCCGCTGAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAATATCATCATGGCCAAAAAAACG
CTGGCTTAAATTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

• Response regulator receiver domain (Response_reg) (732-842)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	97.433	100	0.974