Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   M3Q_RS02525 Genome accession   NC_018706
Coordinates   535269..535904 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii TYTH-1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 530269..540904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M3Q_RS02510 (M3Q_499) - 531056..532240 (+) 1185 WP_000942504.1 S41 family peptidase -
  M3Q_RS02515 (M3Q_500) - 532244..533665 (-) 1422 WP_000840549.1 sigma-54 dependent transcriptional regulator -
  M3Q_RS02520 (M3Q_501) pilS 533690..535258 (-) 1569 WP_001160333.1 PAS domain-containing sensor histidine kinase Regulator
  M3Q_RS02525 (M3Q_502) letA 535269..535904 (-) 636 WP_000633799.1 response regulator Regulator
  M3Q_RS02530 (M3Q_503) pbpG 536117..536740 (+) 624 Protein_495 D-alanyl-D-alanine endopeptidase PBP7/8 -
  M3Q_RS02535 (M3Q_504) thrC 536728..537405 (-) 678 Protein_496 threonine synthase -
  M3Q_RS02540 (M3Q_505) - 537461..538762 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  M3Q_RS02545 (M3Q_506) - 539007..539822 (-) 816 WP_000011159.1 DsbC family protein -
  M3Q_RS02550 (M3Q_507) xerD 539969..540889 (-) 921 WP_000608730.1 site-specific tyrosine recombinase XerD -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=44748 M3Q_RS02525 WP_000633799.1 535269..535904(-) (letA) [Acinetobacter baumannii TYTH-1]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=44748 M3Q_RS02525 WP_000633799.1 535269..535904(-) (letA) [Acinetobacter baumannii TYTH-1]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCAGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment