Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   GE022_RS10470 Genome accession   NZ_CP053790
Coordinates   2151127..2151894 (+) Length   255 a.a.
NCBI ID   WP_159305311.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_77_2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2146127..2156894
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE022_RS10440 (GE022_010430) yaaA 2146360..2146773 (-) 414 WP_164228187.1 S4 domain-containing protein YaaA -
  GE022_RS10445 (GE022_010435) - 2146847..2147802 (-) 956 Protein_2019 IS30 family transposase -
  GE022_RS10450 (GE022_010440) - 2148061..2148795 (-) 735 WP_420853600.1 DDE-type integrase/transposase/recombinase -
  GE022_RS10460 (GE022_010450) rlmH 2149115..2149594 (-) 480 WP_003045866.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GE022_RS10465 (GE022_010455) htrA 2149807..2151030 (+) 1224 WP_164228720.1 S1C family serine protease Regulator
  GE022_RS10470 (GE022_010460) spo0J 2151127..2151894 (+) 768 WP_159305311.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28719.44 Da        Isoelectric Point: 9.9763

>NTDB_id=447242 GE022_RS10470 WP_159305311.1 2151127..2151894(+) (spo0J) [Streptococcus canis strain HL_77_2]
MTELLIQIPIEDIVANPYQPRLQFNQKELEDLARSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKIAGLTKVPAIVK
TISALESMQQAIVENLQRADLNAIEEAKAYQLLIDKNKMTHEEVAKYMGKSRPYISNTLRLLQLPDSIQRAVENGDISAG
HARALLAFPDEKEQLLYATKIKNEGMSVRQIEQLVTPKPKKSKKDKDIFVTSLEKQLAKSLGLKATIKLTSHQTGHLQLP
FANEDELNRIINKLL

Nucleotide


Download         Length: 768 bp        

>NTDB_id=447242 GE022_RS10470 WP_159305311.1 2151127..2151894(+) (spo0J) [Streptococcus canis strain HL_77_2]
ATGACAGAATTATTGATACAAATTCCCATTGAAGATATTGTGGCAAATCCCTATCAGCCAAGACTTCAATTTAATCAAAA
AGAGCTTGAAGACTTAGCAAGGTCAATCAAAGCAAATGGACTTATTCAACCTATTATCGTTCGAAAATCTGATATTTTTG
GTTATGAACTAGTCGCTGGAGAACGACGATTTAAAGCTTCAAAAATAGCAGGACTAACCAAAGTACCAGCTATTGTCAAA
ACAATATCAGCACTTGAAAGCATGCAACAAGCCATTGTTGAAAATTTACAACGAGCTGACCTAAATGCCATCGAAGAAGC
CAAAGCCTACCAGTTACTTATTGACAAAAATAAGATGACTCATGAAGAGGTTGCCAAATATATGGGGAAATCCAGACCCT
ATATTAGCAATACCTTGCGCTTGTTACAACTACCAGATTCTATCCAGAGAGCCGTAGAAAATGGGGACATTAGTGCTGGT
CACGCGCGAGCCTTATTGGCTTTTCCTGATGAAAAAGAACAATTACTATATGCCACTAAAATCAAAAATGAAGGCATGAG
TGTTCGACAAATTGAACAATTGGTTACTCCGAAACCAAAAAAATCAAAAAAAGACAAGGATATTTTTGTCACTTCTTTAG
AAAAACAACTCGCCAAATCTCTTGGCTTAAAAGCAACTATTAAGTTGACATCACATCAGACTGGCCACTTGCAATTACCT
TTTGCTAATGAAGATGAACTAAACAGAATTATCAACAAGTTACTTTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-195)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58