Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   GE023_RS01455 Genome accession   NZ_CP053789
Coordinates   271630..272889 (+) Length   419 a.a.
NCBI ID   WP_093999088.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_98_2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 266630..277889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE023_RS10835 - 268476..268766 (-) 291 WP_159305822.1 hypothetical protein -
  GE023_RS01435 (GE023_001435) - 268923..269273 (+) 351 WP_003046417.1 thioredoxin family protein -
  GE023_RS01440 (GE023_001440) yajC 269386..269745 (+) 360 WP_159305821.1 preprotein translocase subunit YajC -
  GE023_RS01445 (GE023_001445) - 269976..270725 (+) 750 WP_003046424.1 isoprenyl transferase -
  GE023_RS01450 (GE023_001450) - 270738..271532 (+) 795 WP_159305820.1 phosphatidate cytidylyltransferase -
  GE023_RS01455 (GE023_001455) eeP 271630..272889 (+) 1260 WP_093999088.1 RIP metalloprotease RseP Regulator
  GE023_RS01460 (GE023_001460) - 273095..274954 (+) 1860 WP_093999087.1 proline--tRNA ligase -
  GE023_RS01465 (GE023_001465) - 275008..275565 (+) 558 WP_159305184.1 nucleotidyltransferase family protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45682.40 Da        Isoelectric Point: 9.2537

>NTDB_id=447144 GE023_RS01455 WP_093999088.1 271630..272889(+) (eeP) [Streptococcus canis strain HL_98_2]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQEGTLYTLRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGLVKRINLSQSKIDPTSLPMNVTSYDLEDKLSITGLVLDATKTYAVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFNSNHVRVQENGAAAKAGLRDNDQILKINNHKVNDWTDLTK
AVETTSKELGPSETVKVTYKSGDTIKTAAIKPQKQGKQYALGVKARLKTGFVDKLLGGLALAWNGAFTILNALKGLITAF
SLNKLGGPVAMYQLSNQAAQNGLDSVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPLKQETETYITLVGVA
IMVVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=447144 GE023_RS01455 WP_093999088.1 271630..272889(+) (eeP) [Streptococcus canis strain HL_98_2]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGGATTTTAGTCATTGTCCATGAATTTGGGCATTTCTATTTTGCCAA
AAAATCGGGGATTCTTGTCAGAGAATTTGCCATTGGTATGGGCCCCAAAATCTTTTCGCATGTTGACCAAGAAGGGACTC
TCTACACCTTGAGAATTTTGCCCTTGGGTGGTTACGTGCGCATGGCTGGTTGGGGAGATGACAAGACAGAAATCAAGACT
GGAACACCAGCTAGCTTGACGCTAAATGAGCAAGGGTTGGTCAAGCGCATCAACTTATCTCAAAGCAAGATTGATCCTAC
CAGCCTGCCCATGAATGTCACTTCCTATGATTTGGAAGATAAGCTCAGCATTACAGGCTTGGTTTTGGACGCTACCAAGA
CCTATGCTGTTGACCATGACGCCACCATTGTTGAAGAAGATGGCACTGAGATCCGGATTGCTCCGCTTGATGTGCAGTAC
CAAAATGCTAGCATTGGCGGTCGCTTAATCACCAACTTTGCAGGTCCCATGAATAACTTTATTCTAGGGATTGTGGTGTT
TATCCTCCTTGTCTTTTTACAAGGTGGCATGCCCGACTTCAACAGTAATCATGTTCGTGTTCAAGAAAACGGTGCCGCAG
CCAAGGCTGGTCTTCGCGATAATGATCAAATTCTCAAGATTAATAACCATAAGGTTAATGATTGGACTGACCTTACCAAG
GCTGTTGAAACAACCAGCAAGGAGTTAGGTCCTTCAGAAACGGTTAAGGTGACCTATAAATCAGGGGACACTATAAAAAC
TGCGGCTATCAAGCCTCAAAAGCAGGGCAAGCAATATGCTCTAGGGGTTAAAGCAAGATTGAAAACAGGTTTCGTTGATA
AACTCCTAGGCGGTTTGGCATTGGCTTGGAATGGTGCTTTTACTATTTTGAATGCCTTGAAAGGTCTGATTACTGCCTTT
AGTTTAAATAAGTTAGGTGGTCCAGTTGCCATGTACCAACTGTCCAATCAAGCGGCTCAAAATGGCTTGGATTCTGTCTT
ATCTCTCATGGCCATGCTCTCTATCAACTTGGGAATTTTCAATTTAATTCCAATCCCTGCCCTTGACGGCGGGAAAATCT
TGATGAATATTATTGAAGCCATTCGTCGCAAACCCTTGAAACAAGAAACAGAAACCTATATTACCCTTGTTGGGGTTGCT
ATCATGGTTGTTCTGATGATTGCCGTGACGTGGAATGATATTATGAGAGTTTTCTTCTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(206-271)

Peptidase family M50 (Peptidase_M50)

(6-405)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

67.857

100

0.68
  eeP Streptococcus thermophilus LMD-9

67.619

100

0.678