Detailed information NTG0447054

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I5V48_RS11865
• Genome accession: NZ_CP065430
• Coordinates: 2477376..2478470 (+)
• Length: 364 a.a.
• NCBI ID: WP_043025496.1
• Uniprot ID: -
• Organism: Streptococcus suis strain YZDH1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2472376..2483470

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5V48_RS11830 (I5V48_11830)	-	2472569..2472901 (-)	333	WP_043025503.1	hypothetical protein	-
I5V48_RS11835 (I5V48_11835)	-	2473063..2473389 (-)	327	WP_043025501.1	phage head closure protein	-
I5V48_RS11840 (I5V48_11840)	-	2473405..2474031 (-)	627	WP_043025499.1	Rha family transcriptional regulator	-
I5V48_RS11845 (I5V48_11845)	-	2474050..2474247 (-)	198	WP_002941765.1	helix-turn-helix domain-containing protein	-
I5V48_RS11850 (I5V48_11850)	-	2474457..2474951 (+)	495	WP_079395284.1	helix-turn-helix transcriptional regulator	-
I5V48_RS11855 (I5V48_11855)	-	2475747..2476892 (+)	1146	WP_043025498.1	tyrosine-type recombinase/integrase	-
I5V48_RS11860 (I5V48_11860)	yaaA	2476990..2477373 (+)	384	WP_043025497.1	S4 domain-containing protein YaaA	-
I5V48_RS11865 (I5V48_11865)	recF	2477376..2478470 (+)	1095	WP_043025496.1	DNA replication/repair protein RecF	Machinery gene
I5V48_RS11870 (I5V48_11870)	guaB	2478741..2480222 (-)	1482	WP_024418406.1	IMP dehydrogenase	-
I5V48_RS11875 (I5V48_11875)	trpS	2480451..2481476 (-)	1026	WP_043025992.1	tryptophan--tRNA ligase	-
I5V48_RS11880 (I5V48_11880)	-	2481833..2482705 (+)	873	WP_043025995.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42232.31 Da
• Isoelectric Point: 6.7883

>NTDB_id=447054 I5V48_RS11865 WP_043025496.1 2477376..2478470(+) (recF) [Streptococcus suis strain YZDH1]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDISFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTLEYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDNLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=447054 I5V48_RS11865 WP_043025496.1 2477376..2478470(+) (recF) [Streptococcus suis strain YZDH1]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTCTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTTGGAAATAGAAAAGTTCAAGAAATATCTGGTA
ATCGGGAAGAATTGACAATCGAATACCAAACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACA
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATATATCTTTCTT
TATAAACGGAATGAATGCCCATTATGGGAGTCAAGGCCAACACCGTAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAGGAAGTTACACTAGAATATCCAATTCTACTTTTAGACGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAATTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.914	99.176	0.703
recF	Bacillus subtilis subsp. subtilis str. 168	43.243	100	0.44