Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HNE05_RS19165 Genome accession   NZ_CP053697
Coordinates   4166519..4166926 (-) Length   135 a.a.
NCBI ID   WP_160077107.1    Uniprot ID   -
Organism   Aquipseudomonas campi strain S1-A32-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4161519..4171926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HNE05_RS19145 (HNE05_16785) - 4162463..4163326 (-) 864 WP_173211737.1 CheR family methyltransferase -
  HNE05_RS19150 (HNE05_16790) - 4163395..4165437 (-) 2043 WP_173210336.1 methyl-accepting chemotaxis protein -
  HNE05_RS19155 (HNE05_16795) - 4165522..4166058 (-) 537 WP_173210338.1 chemotaxis protein CheW -
  HNE05_RS19160 (HNE05_16800) pilH 4166108..4166473 (-) 366 WP_068824882.1 twitching motility response regulator PilH -
  HNE05_RS19165 (HNE05_16805) pilG 4166519..4166926 (-) 408 WP_160077107.1 twitching motility response regulator PilG Regulator
  HNE05_RS19170 (HNE05_16810) gshB 4167169..4168140 (+) 972 WP_173210340.1 glutathione synthase -
  HNE05_RS19175 (HNE05_16815) - 4168228..4169124 (+) 897 WP_173210342.1 energy transducer TonB -
  HNE05_RS19180 (HNE05_16820) - 4169185..4169754 (+) 570 WP_173210344.1 YqgE/AlgH family protein -
  HNE05_RS19185 (HNE05_16825) ruvX 4169751..4170188 (+) 438 WP_173210346.1 Holliday junction resolvase RuvX -
  HNE05_RS19190 (HNE05_16830) pyrR 4170287..4170793 (+) 507 WP_173210348.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HNE05_RS19195 (HNE05_16835) - 4170803..4171804 (+) 1002 WP_160492279.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14813.21 Da        Isoelectric Point: 6.7128

>NTDB_id=446400 HNE05_RS19165 WP_160077107.1 4166519..4166926(-) (pilG) [Aquipseudomonas campi strain S1-A32-2]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFVPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=446400 HNE05_RS19165 WP_160077107.1 4166519..4166926(-) (pilG) [Aquipseudomonas campi strain S1-A32-2]
ATGGAACAGCATTCCGAGGGTTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACTCTACT
GAAAAAAGTCGGATGCGAAGTCATCACGGCTGTTGATGGCTTTGATGCGCTGGCCAAGATCGCTGATACTCACCCGAGCA
TCATTTTCGTCGACATCATGATGCCGCGGCTCGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGTGCTTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGCCGAATCGTTGGCTCCGACCAGTA
CCTGACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGTGCCATCAAGACGCATGTCCCCGACTTCGTTCCGGTGGAGCAAG
CCTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.8

92.593

0.711
  vicR Streptococcus mutans UA159

41.27

93.333

0.385