Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   HPC59_RS08750 Genome accession   NZ_CP053619
Coordinates   1839325..1840566 (-) Length   413 a.a.
NCBI ID   WP_005689610.1    Uniprot ID   A0A0E3CQJ6
Organism   Lacticaseibacillus rhamnosus strain LV108     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1834325..1845566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HPC59_RS08745 (HPC59_09150) - 1837571..1839301 (-) 1731 WP_005711690.1 proline--tRNA ligase -
  HPC59_RS08750 (HPC59_09155) eeP 1839325..1840566 (-) 1242 WP_005689610.1 RIP metalloprotease RseP Regulator
  HPC59_RS08755 (HPC59_09160) - 1840583..1841371 (-) 789 WP_005711688.1 phosphatidate cytidylyltransferase -
  HPC59_RS08760 (HPC59_09165) - 1841407..1842159 (-) 753 WP_005689614.1 isoprenyl transferase -
  HPC59_RS08765 (HPC59_09170) frr 1842435..1842992 (-) 558 WP_005684323.1 ribosome recycling factor -
  HPC59_RS08770 (HPC59_09175) pyrH 1842992..1843711 (-) 720 WP_005684324.1 UMP kinase -
  HPC59_RS08775 (HPC59_09180) tsf 1844078..1844959 (-) 882 WP_005684325.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45280.89 Da        Isoelectric Point: 8.0452

>NTDB_id=445656 HPC59_RS08750 WP_005689610.1 1839325..1840566(-) (eeP) [Lacticaseibacillus rhamnosus strain LV108]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSIILNDAGKVTRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDEEKLERWSVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLIVNFAGPMNNFILAILTFIIYGLMFGVQVLNTNQIGTVLPGYPAAQAGLKSNATIQAIDGEKIHSFTDL
SSKVSKQAGKSVTFTVKEHGKTQNVVIKPNKDGKIGVEALIEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLQGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIELIRRKPLKPETEGVVTMVGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=445656 HPC59_RS08750 WP_005689610.1 1839325..1840566(-) (eeP) [Lacticaseibacillus rhamnosus strain LV108]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTATTTTGCCAA
GCGTAGCGGAATATTAGTGCGTGAGTTTTCGATTGGCATGGGGCCTAAGCTATGGGCGTCACATAAGAATAATACGACCT
ATACCTTGCGCTTGTTGCCACTGGGCGGATATGTACGTATGGCTGGCTGGCAGGATGAGGAAGATGAAATCAAGCCTGGG
ACCATGCTGAGTATTATCCTGAATGATGCCGGTAAAGTGACACGGATTAATGCCAGTGATAAAACGACGCTGGCAGGTGG
CATGCCGGTACAAGTAAGCCGCGTAGACCTCGTTAAAGACTTGGTGATTGAAGGCTACCCTAATGGCGACGAGGAGAAAC
TGGAGCGTTGGTCGGTTGACCATGATGCCACGATTATTGAAGAAGATGGCACCGAAGTTCAAATTGCGCCAGAAGATGTC
CAATTTCAAAACGCCCCGGTTTGGCGGCGTCTAATTGTTAATTTTGCCGGTCCGATGAATAATTTTATTCTTGCCATTTT
GACCTTTATTATTTACGGTTTGATGTTTGGCGTGCAGGTCTTAAACACCAATCAAATCGGAACGGTACTGCCCGGTTATC
CTGCTGCTCAAGCCGGGCTTAAGTCAAATGCCACAATTCAGGCGATTGATGGTGAAAAAATCCATTCTTTTACTGATCTT
TCCAGCAAAGTCAGCAAACAGGCCGGTAAGTCGGTGACGTTTACAGTTAAAGAGCATGGCAAAACGCAAAATGTGGTTAT
CAAGCCTAACAAGGATGGCAAGATCGGCGTGGAAGCACTCATCGAAAAATCACCGGCACGGGCGTTTACGTATGGTTTCA
CCCAAACCTGGGATTTAGCTGTGCGCACTTGGGATGTCCTCAAATCCATGGTGACTGGCGGCTTTTCGCTTAATAAGTTA
GCTGGGCCGGTCGGGATTTATACCATGACCAGTCAAAGTGCTAAAGGTGGATTGCAGGGATTGCTATTCTTTATGGGATA
CTTAAGTCTCGGCTTGGGAATCAGCAATTTGTTGCCAATCCCGGTTCTGGATGGTGGTAAAATTTTACTGAATCTCATTG
AACTGATTCGGCGCAAACCGTTGAAGCCTGAAACAGAAGGTGTTGTCACCATGGTTGGCCTCGGGTTGATGGTGCTCCTG
ATGCTCGCCGTGACGATTAATGATATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E3CQJ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.057

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501