Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   ICC24_RS17390 Genome accession   NZ_CP065029
Coordinates   3328757..3328897 (-) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   A0ABM6LMF9
Organism   Bacillus licheniformis strain LCDD6     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3323757..3333897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICC24_RS17375 (ICC24_17375) comX 3325974..3326138 (-) 165 WP_011198251.1 competence pheromone ComX -
  ICC24_RS17380 (ICC24_17380) comQ 3326153..3327022 (-) 870 WP_011198252.1 polyprenyl synthetase family protein Regulator
  ICC24_RS17385 (ICC24_17385) - 3327302..3328732 (+) 1431 WP_016886315.1 IS1182 family transposase -
  ICC24_RS17390 (ICC24_17390) degQ 3328757..3328897 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  ICC24_RS17395 (ICC24_17395) - 3329383..3329730 (+) 348 WP_009329512.1 hypothetical protein -
  ICC24_RS17400 (ICC24_17400) - 3329773..3330993 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  ICC24_RS17405 (ICC24_17405) - 3331172..3332641 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  ICC24_RS17410 (ICC24_17410) - 3332659..3333210 (-) 552 WP_003184868.1 cysteine hydrolase family protein -
  ICC24_RS17415 (ICC24_17415) - 3333395..3333796 (-) 402 WP_003184870.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=445451 ICC24_RS17390 WP_003184860.1 3328757..3328897(-) (degQ) [Bacillus licheniformis strain LCDD6]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=445451 ICC24_RS17390 WP_003184860.1 3328757..3328897(-) (degQ) [Bacillus licheniformis strain LCDD6]
GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGAGAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGATAAGTACACATATTTAAAAACCTCGTAA

Domains

Predicted by InterProScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652