Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ICC24_RS17380 Genome accession   NZ_CP065029
Coordinates   3326153..3327022 (-) Length   289 a.a.
NCBI ID   WP_011198252.1    Uniprot ID   Q8VQ63
Organism   Bacillus licheniformis strain LCDD6     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3321153..3332022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICC24_RS17345 (ICC24_17345) - 3321324..3321800 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  ICC24_RS17350 (ICC24_17350) - 3321800..3322084 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  ICC24_RS17355 (ICC24_17355) mnhG 3322068..3322442 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  ICC24_RS17360 (ICC24_17360) - 3322482..3322871 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  ICC24_RS17365 (ICC24_17365) comA 3322888..3323526 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  ICC24_RS17370 (ICC24_17370) - 3323613..3325934 (-) 2322 Protein_3411 ATP-binding protein -
  ICC24_RS17375 (ICC24_17375) comX 3325974..3326138 (-) 165 WP_011198251.1 competence pheromone ComX -
  ICC24_RS17380 (ICC24_17380) comQ 3326153..3327022 (-) 870 WP_011198252.1 polyprenyl synthetase family protein Regulator
  ICC24_RS17385 (ICC24_17385) - 3327302..3328732 (+) 1431 WP_016886315.1 IS1182 family transposase -
  ICC24_RS17390 (ICC24_17390) degQ 3328757..3328897 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  ICC24_RS17395 (ICC24_17395) - 3329383..3329730 (+) 348 WP_009329512.1 hypothetical protein -
  ICC24_RS17400 (ICC24_17400) - 3329773..3330993 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 32743.41 Da        Isoelectric Point: 4.6799

>NTDB_id=445450 ICC24_RS17380 WP_011198252.1 3326153..3327022(-) (comQ) [Bacillus licheniformis strain LCDD6]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA
MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY
KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGDMEKERLMSTLLNNN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=445450 ICC24_RS17380 WP_011198252.1 3326153..3327022(-) (comQ) [Bacillus licheniformis strain LCDD6]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATCGATGCAGGGACAGCATGACGATCTCAGCAACCGCC
CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT
ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATTGAAAATGA
TTATAAAGCACTTTTTTATGATTCAAAAAGCGATATCGCCAAGAAAAAGCGGACGCTTGCGTATTTATATTTGTCAAGAA
AATTTAACCAGCCGTCGATTGATTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT
AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG
AATCGGGGAGCTTGAGTTGGGGGATATGGAGAAAGAACGTTTGATGTCTACCCTGCTGAATAACAATTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8VQ63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.361

100

0.457