Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexB   Type   Machinery gene
Locus tag   ICC24_RS09980 Genome accession   NZ_CP065029
Coordinates   1945306..1947216 (+) Length   636 a.a.
NCBI ID   WP_003181972.1    Uniprot ID   Q65JE1
Organism   Bacillus licheniformis strain LCDD6     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1940306..1952216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICC24_RS09965 (ICC24_09965) ymcA 1941346..1941777 (+) 432 WP_003181967.1 RicAFT regulatory complex protein RicA family protein Regulator
  ICC24_RS09970 (ICC24_09970) cotE 1942020..1942568 (+) 549 WP_003181968.1 outer spore coat protein CotE -
  ICC24_RS09975 (ICC24_09975) hexA 1942679..1945288 (+) 2610 WP_011197985.1 DNA mismatch repair protein MutS Machinery gene
  ICC24_RS09980 (ICC24_09980) hexB 1945306..1947216 (+) 1911 WP_003181972.1 DNA mismatch repair endonuclease MutL Machinery gene
  ICC24_RS09985 (ICC24_09985) - 1947551..1947832 (+) 282 WP_003181975.1 putative quinol monooxygenase -
  ICC24_RS09990 (ICC24_09990) - 1948035..1948820 (+) 786 WP_095325208.1 alpha/beta hydrolase family protein -
  ICC24_RS22130 - 1949060..1950829 (+) 1770 Protein_1946 T7SS effector LXG polymorphic toxin -
  ICC24_RS10000 (ICC24_10000) - 1950858..1951250 (+) 393 WP_145614092.1 hypothetical protein -

Sequence

Protein


Download         Length: 636 a.a.        Molecular weight: 71389.32 Da        Isoelectric Point: 5.2899

>NTDB_id=445405 ICC24_RS09980 WP_003181972.1 1945306..1947216(+) (hexB) [Bacillus licheniformis strain LCDD6]
MAKIVQLPDDLSNKIAAGEVVERPASVVKELVENAIDANSSVIEIDVEEAGLASIKVLDDGEGMDAEDCRTAFLRHATSK
IKDENDLFRVRTLGFRGEALPSIASVSHLSIKTSTGEGAGTHLTLQGGRIISEQKAPSRRGTEITVTNLFFNTPARLKYM
KTIHTELGNITDVVNRIALAHPEVSIRLRHQGKTLLQTNGNGDVRHVLAAIYGTAVAKKMLPLEARSLDFEVKGYIALPE
ITRASRNYMSSVVNGRYIKNFPLVKAIHEGYHTLLPIGRHPITFIEINMDPLLVDVNVHPSKLEVRLSKETELHELIRDA
IKDVFKQQQLIPSVQVPKKTAPLINKPEQQKLDFDQVREPAPLSDSDVEREYKPEPSFSAMKLSSLVKDPPPSAPVEREE
NVMQDTEPEWPGAEEYTPEAAPAVQAEPEQAGENVQDEETPKERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIK
YEYFREKVGEVESEVQDLLVPLTFHYSKNEALTIDQHLDDLAKVGVFLESFGAGSYIVRCHPTWFPKGEETTIIEDIIQQ
VLDDRTIDIKKLREEAAIMMSCKGSIKANHHLRDDEITALLDELRRTSDPFTCPHGRPIIIHYSTYEMEKMFKRVM

Nucleotide


Download         Length: 1911 bp        

>NTDB_id=445405 ICC24_RS09980 WP_003181972.1 1945306..1947216(+) (hexB) [Bacillus licheniformis strain LCDD6]
TTGGCAAAAATTGTTCAGCTGCCTGACGATTTATCGAATAAAATCGCGGCGGGTGAAGTAGTGGAAAGGCCGGCGTCGGT
CGTCAAAGAGCTTGTCGAAAATGCAATCGATGCGAACAGCTCCGTGATTGAAATCGATGTTGAAGAAGCGGGTCTCGCCT
CGATTAAAGTGCTTGACGACGGCGAAGGGATGGACGCAGAAGACTGCAGAACGGCTTTTTTGCGTCATGCCACAAGCAAA
ATCAAAGACGAAAACGACCTGTTTCGCGTCAGAACGCTCGGATTTCGCGGAGAAGCTTTGCCAAGTATCGCGTCTGTCTC
ACACTTAAGCATTAAAACGAGCACCGGAGAAGGGGCAGGCACCCATTTGACGCTGCAGGGGGGAAGAATCATTTCCGAGC
AAAAAGCGCCAAGCCGCAGAGGAACCGAAATTACGGTTACCAACCTGTTTTTCAATACGCCGGCAAGGCTGAAATACATG
AAAACGATTCATACCGAGCTTGGCAACATCACAGATGTGGTCAACAGAATCGCCCTTGCCCATCCGGAAGTTTCGATCAG
GCTGCGTCATCAAGGGAAAACGCTTCTGCAGACAAACGGAAACGGCGATGTCCGCCACGTGCTTGCGGCGATTTACGGCA
CGGCGGTTGCCAAAAAAATGCTCCCGCTTGAAGCGAGATCTCTTGACTTTGAAGTGAAGGGCTATATCGCTCTTCCTGAA
ATTACGCGCGCCTCGCGAAATTACATGTCATCTGTCGTCAACGGCAGATACATTAAAAACTTCCCGCTCGTAAAAGCGAT
CCACGAGGGCTACCATACGCTTCTTCCGATCGGCCGCCATCCGATCACGTTCATTGAAATCAACATGGACCCGCTCCTTG
TGGACGTCAACGTGCACCCGTCAAAGCTGGAGGTCAGGCTGAGCAAAGAGACGGAGCTTCACGAGCTGATTCGCGACGCC
ATCAAAGACGTCTTTAAACAGCAGCAGCTCATTCCAAGCGTGCAGGTCCCGAAAAAAACCGCACCTCTGATCAATAAACC
AGAGCAGCAAAAGCTTGATTTCGACCAGGTACGAGAACCGGCACCTCTTTCTGATTCTGATGTTGAAAGAGAGTATAAGC
CGGAGCCTTCGTTTTCGGCGATGAAATTAAGCTCGCTTGTCAAAGACCCGCCGCCTTCCGCTCCCGTAGAGCGCGAAGAA
AACGTAATGCAGGACACCGAGCCTGAATGGCCCGGAGCTGAAGAGTATACGCCTGAAGCCGCGCCGGCCGTACAAGCAGA
ACCGGAACAGGCAGGAGAGAACGTCCAGGACGAAGAGACGCCAAAAGAAAGGGTGCCGATCATGTATCCGATCGGCCAAA
TGCACGGCACCTACATACTTGCCCAAAATGAAAACGGGCTGTACATCATCGATCAGCACGCCGCACAGGAGCGGATCAAA
TACGAATATTTCCGTGAAAAAGTCGGGGAAGTCGAATCGGAAGTCCAGGACCTGCTTGTGCCGCTGACATTCCATTATTC
AAAAAATGAAGCGCTGACGATCGACCAGCACTTGGACGATTTAGCCAAAGTCGGCGTCTTTCTCGAATCGTTCGGCGCCG
GCAGCTATATCGTCCGATGCCACCCGACATGGTTTCCGAAAGGGGAAGAAACGACGATCATTGAAGACATCATTCAGCAG
GTCCTTGATGACCGCACGATCGACATCAAAAAACTGCGCGAAGAAGCCGCAATCATGATGAGCTGCAAAGGCTCCATCAA
AGCCAATCATCACCTGCGGGACGACGAAATCACCGCCCTGCTCGATGAGCTGCGCAGAACATCCGACCCTTTCACATGCC
CGCACGGCCGGCCGATCATCATCCACTACTCCACCTATGAGATGGAGAAGATGTTTAAGCGGGTAATGTAA

Domains

Predicted by InterProScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)

(25-136)

MutL C terminal dimerisation domain (MutL_C)

(451-592)

DNA mismatch repair protein, C-terminal domain (DNA_mis_repair)

(209-324)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65JE1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

45.859

100

0.47