Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ICC24_RS09725 Genome accession   NZ_CP065029
Coordinates   1883774..1885039 (+) Length   421 a.a.
NCBI ID   WP_085959524.1    Uniprot ID   -
Organism   Bacillus licheniformis strain LCDD6     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1878774..1890039
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICC24_RS09700 (ICC24_09700) pyrH 1879560..1880282 (+) 723 WP_009328506.1 UMP kinase -
  ICC24_RS09705 (ICC24_09705) frr 1880299..1880841 (+) 543 WP_202604249.1 ribosome recycling factor -
  ICC24_RS09710 (ICC24_09710) - 1880971..1881753 (+) 783 WP_003181841.1 isoprenyl transferase -
  ICC24_RS09715 (ICC24_09715) - 1881766..1882569 (+) 804 WP_016885472.1 phosphatidate cytidylyltransferase -
  ICC24_RS09720 (ICC24_09720) dxr 1882616..1883767 (+) 1152 WP_003181846.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  ICC24_RS09725 (ICC24_09725) eeP 1883774..1885039 (+) 1266 WP_085959524.1 RIP metalloprotease RseP Regulator
  ICC24_RS09730 (ICC24_09730) - 1885149..1886867 (+) 1719 WP_003181850.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46724.54 Da        Isoelectric Point: 5.4857

>NTDB_id=445400 ICC24_RS09725 WP_085959524.1 1883774..1885039(+) (eeP) [Bacillus licheniformis strain LCDD6]
MFVNTVIAFILIFGTLVFFHELGHLILAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPIGGFVRMAGEDPEMIEVK
PGYTVGLLFDSENKVEKIIINQKEKYPDALVIEVEQADLEHQMRITGYEHGNEDHLSSFSVSETSFFIVDGEEVQIAPYN
RQFHSKTVWQRIKAIAAGPIMNFILAYVILVMLGLMQGVPSDEPVLGKLIDNGRAAEAGLQEGDRIQTINGENMRSWTDI
VNTVREHPEKELKIVLMRDNVKLTKYVTPEAVKAGDETVGRFGAYNPVKTGVLTSISYGATETATVAQSIVTNLGKLVTG
QFSIDMLAGPVGIYDMTDQVARTGVINLLKLAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFIG
VAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=445400 ICC24_RS09725 WP_085959524.1 1883774..1885039(+) (eeP) [Bacillus licheniformis strain LCDD6]
ATGTTCGTGAATACTGTGATCGCGTTTATTCTTATTTTTGGAACGCTCGTATTTTTCCATGAGCTTGGTCATCTCATCCT
TGCTCAAAGAGCCGGAATACTGTGCCGGGAGTTTGCTATCGGCTTCGGTCCGAAAATCTTTTCGTTTAAGAAAAATGAGA
CCGTTTATACGATCAGGCTTCTTCCGATCGGCGGCTTTGTCAGAATGGCCGGCGAAGATCCTGAGATGATTGAAGTGAAG
CCCGGTTATACGGTCGGGCTGTTGTTCGACAGCGAAAACAAGGTCGAAAAGATCATTATCAACCAAAAAGAAAAGTATCC
CGACGCATTGGTCATTGAAGTGGAGCAGGCCGACCTGGAGCACCAGATGAGGATTACGGGCTATGAGCACGGCAATGAAG
ATCATCTCTCTTCATTTTCTGTCAGTGAAACGTCCTTTTTCATCGTAGACGGGGAAGAAGTCCAGATCGCTCCTTACAAC
CGCCAATTTCATTCGAAAACGGTTTGGCAGCGCATCAAAGCGATTGCTGCCGGACCGATCATGAACTTTATTTTGGCTTA
TGTCATACTCGTGATGCTCGGACTGATGCAGGGAGTGCCGTCTGACGAGCCGGTGCTCGGCAAGTTGATAGACAACGGAC
GGGCGGCGGAAGCAGGCCTCCAGGAGGGAGACCGCATTCAAACGATCAACGGGGAGAACATGAGGTCGTGGACGGATATT
GTCAACACGGTCAGAGAACACCCTGAAAAAGAACTGAAAATCGTTTTGATGCGCGACAATGTCAAGCTGACGAAATACGT
AACACCTGAAGCTGTCAAGGCAGGGGATGAAACCGTCGGCAGATTCGGCGCTTACAATCCTGTGAAAACAGGCGTTCTGA
CATCGATTTCCTACGGTGCGACCGAAACGGCGACAGTGGCCCAGAGCATCGTCACCAATCTCGGAAAGCTCGTCACAGGA
CAATTCTCAATCGACATGCTGGCCGGTCCTGTCGGCATTTATGACATGACAGACCAAGTGGCCAGGACAGGCGTTATCAA
CCTGCTGAAGCTGGCCGCATTTTTAAGCATCAACCTCGGGATCGTCAACCTTCTGCCAATCCCTGCGCTGGACGGCGGAA
GACTGTTGTTCCTGTTTATTGAAGCGATCCGCGGGAAGCCGATCAACCGCGAAAAAGAAGCGTTTGTCGTCTTTATCGGC
GTCGCATTTTTGATGCTCCTAATGCTTGTCGTCACATGGAACGATATCCAGCGCTTATTTCTGTAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(211-258)

Peptidase family M50 (Peptidase_M50)

(8-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

38.928

100

0.397
  eeP Streptococcus thermophilus LMD-9

38.785

100

0.394