Detailed information NTG0445152

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: IIE09_RS20935
• Genome accession: NZ_CP064825
• Coordinates: 4339936..4341345 (-)
• Length: 469 a.a.
• NCBI ID: WP_001315107.1
• Uniprot ID: A0A0H2Z4V2
• Organism: Escherichia coli UTI89
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 4334936..4346345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IIE09_RS20915	yihA	4336291..4336923 (-)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
IIE09_RS24665	-	4337220..4337386 (+)	167	Protein_4126	hypothetical protein	-
IIE09_RS20920	yihI	4337505..4338014 (+)	510	WP_001351246.1	Der GTPase-activating protein YihI	-
IIE09_RS20925	hemN	4338203..4339576 (+)	1374	WP_000116096.1	oxygen-independent coproporphyrinogen III oxidase	-
IIE09_RS20930	yshB	4339714..4339824 (-)	111	WP_000893994.1	YshB family small membrane protein	-
IIE09_RS20935	luxO	4339936..4341345 (-)	1410	WP_001315107.1	nitrogen regulation protein NR(I)	Regulator
IIE09_RS20940	glnL	4341357..4342406 (-)	1050	WP_000190574.1	nitrogen regulation protein NR(II)	-
IIE09_RS20945	glnA	4342580..4343989 (-)	1410	WP_001271717.1	glutamate--ammonia ligase	-
IIE09_RS20950	typA	4344362..4346185 (+)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52302.79 Da
• Isoelectric Point: 6.5091

>NTDB_id=445152 IIE09_RS20935 WP_001315107.1 4339936..4341345(-) (luxO) [Escherichia coli UTI89]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESNVPESTSHMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=445152 IIE09_RS20935 WP_001315107.1 4339936..4341345(-) (luxO) [Escherichia coli UTI89]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGAGCGGG
TTTAACCTGTACGACATTTGAGAACGGCGCGGAAGTACTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCGATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCATTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCCGTGGCGCTGGTTGAGCGCGCCATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGTGAAGCGCCAGCCATGCAGGACGTGTTCCGGATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAGTCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTTCATCGCCACAGTCCGCG
AGCCAAAGCGCCATTTATCGCGCTGAATATGGCGGCTATCCCGAAGGATTTGATCGAATCCGAACTGTTTGGTCACGAGA
AAGGCGCATTTACCGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAAGCTGATGGCGGTACATTATTTCTCGATGAA
ATTGGCGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGATGGTCAGTTTTATCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTTGAACAGCGGGTGCAGGAAGGCAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTCATCCGCGTTCATCTGCCGCCACTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCACGCCATTTTTTACAGGTTGCCGCGCGAGAGCTGGGCGTAGAAGCGAAGTTGCTGCATCCGGAAACCGAAGCCGC
GCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGTCGCTGGCTAACGGTGATGGCTGCCGGAC
AGGAAGTGTTGATTCAGGATTTGCCTGGCGAACTGTTTGAATCAAACGTACCGGAAAGCACTTCACACATGCAGCCGGAC
AGTTGGGCAACGCTGTTAGCACAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAACCTGCTTTCCGAAGCACAGCC
AGAGCTGGAACGGACGTTACTGACCACCGCGCTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTTGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A0H2Z4V2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.655	98.934	0.392
pilR	Pseudomonas aeruginosa PAK	38.854	100	0.39