Detailed information NTG0445061

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: ITP52_RS19315
• Genome accession: NZ_CP064818
• Coordinates: 3788150..3790480 (+)
• Length: 776 a.a.
• NCBI ID: WP_041850028.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SH1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3783150..3795480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ITP52_RS19275 (ITP52_19275)	yhbY	3783387..3783677 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
ITP52_RS19280 (ITP52_19280)	nadD	3783689..3784258 (+)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
ITP52_RS19285 (ITP52_19285)	yqeK	3784248..3784808 (+)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ITP52_RS19290 (ITP52_19290)	rsfS	3784826..3785182 (+)	357	WP_003237112.1	ribosome silencing factor	-
ITP52_RS19295 (ITP52_19295)	yqeM	3785179..3785922 (+)	744	WP_032726197.1	class I SAM-dependent methyltransferase	-
ITP52_RS19300 (ITP52_19300)	comER	3785988..3786809 (-)	822	WP_041850030.1	late competence protein ComER	-
ITP52_RS19305 (ITP52_19305)	comEA	3786893..3787510 (+)	618	WP_041850029.1	competence protein ComEA	Machinery gene
ITP52_RS19310 (ITP52_19310)	comEB	3787577..3788146 (+)	570	WP_003229978.1	ComE operon protein 2	-
ITP52_RS19315 (ITP52_19315)	comEC	3788150..3790480 (+)	2331	WP_041850028.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ITP52_RS19320 (ITP52_19320)	yqzM	3790520..3790654 (-)	135	WP_003229983.1	YqzM family protein	-
ITP52_RS19325 (ITP52_19325)	-	3790695..3790844 (+)	150	WP_120363468.1	hypothetical protein	-
ITP52_RS19330 (ITP52_19330)	holA	3790884..3791927 (+)	1044	WP_029317888.1	DNA polymerase III subunit delta	-
ITP52_RS19335 (ITP52_19335)	rpsT	3791942..3792208 (-)	267	WP_003229989.1	30S ribosomal protein S20	-
ITP52_RS19340 (ITP52_19340)	gpr	3792412..3793518 (+)	1107	WP_014480309.1	GPR endopeptidase	-
ITP52_RS19345 (ITP52_19345)	spoIIP	3793581..3794786 (+)	1206	WP_014477383.1	spore autolysin SpoIIP	-
ITP52_RS19350 (ITP52_19350)	yqxA	3794803..3795141 (+)	339	WP_041850027.1	YqxA family protein	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86739.47 Da
• Isoelectric Point: 7.4973

>NTDB_id=445061 ITP52_RS19315 WP_041850028.1 3788150..3790480(+) (comEC) [Bacillus subtilis strain SH1]
MRNSRLLLPMAAASATVGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIATIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPKHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITKIADVDVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKMLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGVLSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=445061 ITP52_RS19315 WP_041850028.1 3788150..3790480(+) (comEC) [Bacillus subtilis strain SH1]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGTTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGCCACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAAACACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGCGAACCTGAAAATTTCAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTGCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGATGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCAATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATCCGCCTTGGTATAACAAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGTCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGCCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCAGCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTTCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGTTAATCACAAAAATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGTTCTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGCGGC
ATTTGCTGCACAGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGATGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCATCTCTCGTTCTGTGGATGGAGACGGGCGTTCTGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.809	100	0.978