Detailed information NTG0444776

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HK440_RS02560
• Genome accession: NZ_CP053396
• Coordinates: 548122..548922 (+)
• Length: 266 a.a.
• NCBI ID: WP_001916960.1
• Uniprot ID: A0AAE7ARP7
• Organism: Helicobacter pylori strain HPY
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 543122..553922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HK440_RS02525 (HK440_02525)	pseH	543622..544164 (+)	543	WP_001916965.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HK440_RS02530 (HK440_02530)	-	544097..545035 (-)	939	WP_001916964.1	tetraacyldisaccharide 4'-kinase	-
HK440_RS02535 (HK440_02535)	-	545032..545814 (-)	783	WP_001916963.1	NAD+ synthase	-
HK440_RS02545 (HK440_02545)	ilvC	546063..547055 (+)	993	WP_001916962.1	ketol-acid reductoisomerase	-
HK440_RS02550 (HK440_02550)	minD	547074..547880 (+)	807	WP_001019104.1	septum site-determining protein MinD	-
HK440_RS02555 (HK440_02555)	minE	547877..548110 (+)	234	WP_001916961.1	cell division topological specificity factor MinE	-
HK440_RS02560 (HK440_02560)	dprA	548122..548922 (+)	801	WP_001916960.1	DNA-processing protein DprA	Machinery gene
HK440_RS02565 (HK440_02565)	dprB	548919..549323 (+)	405	WP_001916959.1	Holliday junction resolvase RuvX	Machinery gene
HK440_RS02570 (HK440_02570)	-	549449..550243 (+)	795	WP_001916957.1	tetratricopeptide repeat protein	-
HK440_RS02575 (HK440_02575)	-	550432..550770 (+)	339	WP_001916956.1	hypothetical protein	-
HK440_RS02580 (HK440_02580)	-	550754..551320 (+)	567	WP_001916955.1	hypothetical protein	-
HK440_RS02585 (HK440_02585)	-	551467..552348 (-)	882	WP_001916954.1	RluA family pseudouridine synthase	-
HK440_RS02590 (HK440_02590)	recJ	552348..553898 (-)	1551	WP_001916953.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29878.85 Da
• Isoelectric Point: 8.9063

>NTDB_id=444776 HK440_RS02560 WP_001916960.1 548122..548922(+) (dprA) [Helicobacter pylori strain HPY]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=444776 HK440_RS02560 WP_001916960.1 548122..548922(+) (dprA) [Helicobacter pylori strain HPY]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGATCCCCCTAAAAAACT
CTATTGTGTGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCTCAGCGCTTGAATGAGAGTGATGG
CACTAATGAACTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41