Detailed information NTG0444499

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: HNO12_RS17235
• Genome accession: NZ_CP053376
• Coordinates: 3508686..3509849 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain WF02
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3503686..3514849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HNO12_RS17205 (HNO12_17255)	-	3503951..3504370 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
HNO12_RS17210 (HNO12_17260)	comFC	3504444..3505133 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
HNO12_RS17215 (HNO12_17265)	-	3505139..3505423 (-)	285	WP_003151389.1	competence protein ComFB	-
HNO12_RS17220 (HNO12_17270)	comFA	3505481..3506866 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
HNO12_RS17225 (HNO12_17275)	-	3506974..3507822 (-)	849	WP_024085866.1	DegV family protein	-
HNO12_RS17230 (HNO12_17280)	degU	3507920..3508609 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
HNO12_RS17235 (HNO12_17285)	degS	3508686..3509849 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
HNO12_RS17240 (HNO12_17290)	-	3510072..3510719 (+)	648	WP_003151384.1	YigZ family protein	-
HNO12_RS17245 (HNO12_17295)	-	3510724..3511938 (+)	1215	WP_014305930.1	LCP family protein	-
HNO12_RS17250 (HNO12_17300)	-	3512028..3513104 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
HNO12_RS17255 (HNO12_17305)	-	3513237..3514433 (-)	1197	WP_024085869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=444499 HNO12_RS17235 WP_003151385.1 3508686..3509849(-) (degS) [Bacillus amyloliquefaciens strain WF02]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=444499 HNO12_RS17235 WP_003151385.1 3508686..3509849(-) (degS) [Bacillus amyloliquefaciens strain WF02]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948