Detailed information NTG0044372

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: A964_RS10190
• Genome accession: NC_018646
• Coordinates: 2040257..2041366 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae GD201008-001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2035257..2046366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A964_RS10165 (A964_1998)	-	2035629..2036468 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
A964_RS10170 (A964_1999)	pgsA	2036468..2037010 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
A964_RS10175 (A964_2000)	yfmH	2037133..2038416 (-)	1284	WP_000217765.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
A964_RS10180 (A964_2001)	yfmF	2038418..2039662 (-)	1245	WP_000706190.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
A964_RS10185 (A964_2002)	yaaA	2039901..2040254 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
A964_RS10190 (A964_2003)	recF	2040257..2041366 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
A964_RS10195 (A964_2004)	-	2041378..2042244 (-)	867	WP_000398683.1	GRP family sugar transporter	-
A964_RS10200 (A964_2005)	-	2042300..2042962 (-)	663	WP_001871057.1	helix-turn-helix domain-containing protein	-
A964_RS10205 (A964_2006)	guaB	2043037..2044518 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
A964_RS10210 (A964_2007)	-	2044675..2045160 (-)	486	WP_001034427.1	arginine repressor	-
A964_RS10215 (A964_2008)	-	2045170..2045850 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=44372 A964_RS10190 WP_000264870.1 2040257..2041366(+) (recF) [Streptococcus agalactiae GD201008-001]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=44372 A964_RS10190 WP_000264870.1 2040257..2041366(+) (recF) [Streptococcus agalactiae GD201008-001]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447