Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | IUJ40_RS06360 | Genome accession | NZ_CP064389 |
| Coordinates | 1226959..1227258 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain PartE-Saureus-RM8376 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1221959..1232258
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ40_RS06320 (IUJ40_06330) | - | 1222020..1222223 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| IUJ40_RS06325 (IUJ40_06335) | - | 1222220..1223206 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| IUJ40_RS06330 (IUJ40_06340) | - | 1223206..1223535 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| IUJ40_RS06335 (IUJ40_06345) | - | 1223532..1224155 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| IUJ40_RS06340 (IUJ40_06350) | comGA | 1224207..1225181 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IUJ40_RS06345 (IUJ40_06355) | comGB | 1225153..1226223 (+) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| IUJ40_RS06350 (IUJ40_06360) | comGC | 1226237..1226548 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IUJ40_RS06355 (IUJ40_06365) | comGD | 1226526..1226972 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IUJ40_RS06360 (IUJ40_06370) | comGE | 1226959..1227258 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| IUJ40_RS06365 (IUJ40_06375) | comGF | 1227176..1227673 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IUJ40_RS06370 (IUJ40_06380) | - | 1227770..1227916 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| IUJ40_RS06375 (IUJ40_06385) | - | 1227906..1228430 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| IUJ40_RS06380 (IUJ40_06390) | gcvT | 1228589..1229680 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| IUJ40_RS06385 (IUJ40_06395) | gcvPA | 1229700..1231046 (+) | 1347 | WP_000019693.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=443568 IUJ40_RS06360 WP_000844413.1 1226959..1227258(+) (comGE) [Staphylococcus aureus strain PartE-Saureus-RM8376]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=443568 IUJ40_RS06360 WP_000844413.1 1226959..1227258(+) (comGE) [Staphylococcus aureus strain PartE-Saureus-RM8376]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |