Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   HLJ12_RS10460 Genome accession   NZ_CP053180
Coordinates   2222726..2223994 (-) Length   422 a.a.
NCBI ID   WP_087664346.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain SP11     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2217726..2228994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HLJ12_RS10455 (HLJ12_10435) - 2220947..2222656 (-) 1710 WP_008381112.1 proline--tRNA ligase -
  HLJ12_RS10460 (HLJ12_10440) eeP 2222726..2223994 (-) 1269 WP_087664346.1 RIP metalloprotease RseP Regulator
  HLJ12_RS10465 (HLJ12_10445) - 2224145..2224951 (-) 807 WP_005236992.1 phosphatidate cytidylyltransferase -
  HLJ12_RS10470 (HLJ12_10450) - 2224948..2225748 (-) 801 WP_005236994.1 isoprenyl transferase -
  HLJ12_RS10475 (HLJ12_10455) frr 2225940..2226497 (-) 558 WP_005229434.1 ribosome recycling factor -
  HLJ12_RS10480 (HLJ12_10460) pyrH 2226499..2227221 (-) 723 WP_005229433.1 UMP kinase -
  HLJ12_RS10485 (HLJ12_10465) tsf 2227369..2228250 (-) 882 WP_005229432.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45413.76 Da        Isoelectric Point: 4.6016

>NTDB_id=443216 HLJ12_RS10460 WP_087664346.1 2222726..2223994(-) (eeP) [Enterococcus casseliflavus strain SP11]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAVTYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATVVTGIEAGTPAAEAGLKNGDEILAVEGVDVSNWS
ELTTEIQKYPATKITLEVKRGAETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGVRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=443216 HLJ12_RS10460 WP_087664346.1 2222726..2223994(-) (eeP) [Enterococcus casseliflavus strain SP11]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTGGTGGTAGTGATTCACGAATTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTATTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTGCCATTAGGCGGGTATGTCCAAATGGCAGGCTGGGGCGAAGATGAGACTGAATTAACGCCT
GGCATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTCATCAAAATCAATACAAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCCATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACTGGCTTCATCAACGGCAATGAACAAG
AAGCGGTTACGTACGCTGTGGATCATGACGCAACGATCATTCATGAAGATGGCGTTGAAGTTCGGATCGCACCAAAAGAC
GTTCAATTCCAGTCTGCAAAGCTGTGGCAACGAATGCTGACGAATTTTGCAGGACCGATGAATAACTTTATTTTATCCTT
GGTTTTATTCACTGGGTTGGTGTTTGCGCAAGGTGGTGTCGCGAATCAAGATGCAACCGTCGTGACAGGAATCGAAGCAG
GAACCCCGGCAGCTGAAGCCGGGCTGAAAAATGGCGACGAAATCCTAGCAGTTGAAGGCGTCGATGTTTCCAACTGGTCA
GAATTGACGACAGAGATCCAAAAGTACCCAGCTACTAAGATTACTCTAGAAGTCAAACGAGGAGCGGAAACACTTGATTT
GACAGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATCGGTTTCTTAGGGATCACGGCTTCGTTAAAAACTGGGA
TCGGAGACATCTTACTGGGTGGCTTACAAACGACCATTGACAATTCGCTGGTTATTTTTAGAGCAGTCGGCAACTTGATC
GCCCAACCAGATATCAATAAATTGGGCGGACCGGTAGCGATTTTCCAACTGTCTTCTCAAGCCGCATCGCAAGGTGTCAC
AACGGTGATCGCCATGATGGCGATGATTTCCATCAATTTGGGGATCTTTAATTTATTGCCAATTCCTGGATTAGATGGTG
GGAAACTGGTTTTAAATATTTTAGAAGGTGTGCGAGGCAAGCCAATCAGTCAAGAAAAAGAAGGCATCATTACCCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ)

(201-258)

Peptidase family M50 (Peptidase_M50)

(7-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

51.981

100

0.528
  eeP Streptococcus thermophilus LMG 18311

51.522

100

0.521