Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   IUJ46_RS06385 Genome accession   NZ_CP064364
Coordinates   1222562..1223596 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain PartK-Spyogenes-RM8376     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1217562..1228596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ46_RS06350 (IUJ46_06320) - 1218338..1218640 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  IUJ46_RS06355 (IUJ46_06325) - 1218633..1218929 (-) 297 WP_002983486.1 YlxR family protein -
  IUJ46_RS06360 (IUJ46_06330) nusA 1218945..1220102 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  IUJ46_RS06365 (IUJ46_06335) rimP 1220277..1220813 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  IUJ46_RS06375 (IUJ46_06345) trmB 1221072..1221707 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  IUJ46_RS06380 (IUJ46_06350) - 1221707..1222498 (-) 792 WP_002983385.1 phosphotransferase family protein -
  IUJ46_RS06385 (IUJ46_06355) pptB 1222562..1223596 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  IUJ46_RS06390 (IUJ46_06360) pptA 1223599..1224324 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  IUJ46_RS06395 (IUJ46_06365) - 1224396..1224815 (+) 420 WP_002983376.1 HIT family protein -
  IUJ46_RS06400 (IUJ46_06370) - 1224812..1225168 (+) 357 WP_002988657.1 hypothetical protein -
  IUJ46_RS06405 (IUJ46_06375) - 1225279..1226553 (-) 1275 WP_010922584.1 LCP family protein -
  IUJ46_RS06410 (IUJ46_06380) - 1226562..1227086 (-) 525 WP_009880752.1 N-acetyltransferase -
  IUJ46_RS06415 (IUJ46_06385) tsaE 1227061..1227522 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=443014 IUJ46_RS06385 WP_010922583.1 1222562..1223596(-) (pptB) [Streptococcus pyogenes strain PartK-Spyogenes-RM8376]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=443014 IUJ46_RS06385 WP_010922583.1 1222562..1223596(-) (pptB) [Streptococcus pyogenes strain PartK-Spyogenes-RM8376]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGCCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAACGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCCCTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427