Detailed information NTG0442952

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: IT766_RS12050
• Genome accession: NZ_CP064350
• Coordinates: 2652427..2653827 (+)
• Length: 466 a.a.
• NCBI ID: WP_000086389.1
• Uniprot ID: -
• Organism: Vibrio cholerae C6706
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 2647427..2658827

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IT766_RS12030 (IT766_12030)	-	2648575..2648898 (-)	324	WP_000244705.1	hypothetical protein	-
IT766_RS12035 (IT766_12035)	glnA	2649043..2650452 (+)	1410	WP_000110151.1	glutamate--ammonia ligase	-
IT766_RS12040 (IT766_12040)	-	2650630..2651220 (+)	591	WP_000099256.1	DUF4124 domain-containing protein	-
IT766_RS12045 (IT766_12045)	glnL	2651359..2652417 (+)	1059	WP_001918943.1	nitrogen regulation protein NR(II)	-
IT766_RS12050 (IT766_12050)	luxO	2652427..2653827 (+)	1401	WP_000086389.1	nitrogen regulation protein NR(I)	Regulator
IT766_RS12055 (IT766_12055)	-	2653886..2656417 (+)	2532	WP_001128660.1	EAL domain-containing protein	-
IT766_RS12060 (IT766_12060)	add	2656509..2657513 (+)	1005	WP_000633281.1	adenosine deaminase	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 52319.80 Da
• Isoelectric Point: 6.6387

>NTDB_id=442952 IT766_RS12050 WP_000086389.1 2652427..2653827(+) (luxO) [Vibrio cholerae C6706]
MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLNQVHQRTPELPVII
MTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSR
SSISVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD
EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIE
KLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDIS
WQKQLETWAKSALASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKELY

Nucleotide

• Length: 1401 bp

>NTDB_id=442952 IT766_RS12050 WP_000086389.1 2652427..2653827(+) (luxO) [Vibrio cholerae C6706]
ATGAGTAGAGGATACGTCTGGGTTGTCGATGATGATAGTTCCATTCGCTGGGTAATGGAGAAAACGCTCTCTTCAGCCCA
TATAAAATGCGAAACCTTCGCAGATGCGGAAAGCGTACTGCTGGCACTGGAGCGTGAAACCCCCGACGTTCTTGTCTCAG
ATATTCGCATGCCAGGGATGGATGGCATTGCTCTGCTCAATCAAGTACACCAACGCACCCCTGAACTTCCGGTGATCATT
ATGACCGCGCATTCGGATCTGGATGCCGCCGTCAATGCCTACCAACAAGGTGCCTTTGAGTATCTTCCCAAGCCTTTTGA
TGTCGATGAAACCCTCACCTTAGTCGAACGTGCCATCGCTCATGGTCAAGAGCAGCGCAAGACATCTCATCGTCCCAGTG
AAAACTATTCCGCCCCTGAAATCATTGGCGAAGCGCCGGCTATGCAAGAAGTGTTTCGCGCAATTGGTCGCTTATCACGC
TCTTCGATTTCGGTATTGATCAACGGTGAATCGGGAACCGGTAAAGAATTGGTCGCTCATGCTCTGCATAGACATAGTCC
TCGTGCCCAAAAGCCGTTTATTGCCCTCAATATGGCGGCGATTCCCAAAGATCTCATCGAATCTGAACTGTTTGGCCATG
AAAAAGGCGCGTTTACTGGTGCAAATACCGTGCGCCAAGGTCGCTTCGAACAAGCCAATGGCGGCACTTTATTTCTTGAT
GAAATTGGCGATATGCCGCTCGATATTCAAACTCGGTTATTGCGCGTGTTGGCGGATGGTCAGTTTTATCGCGTTGGCGG
TCATGTCGCGATAAAAGTCGATGTGCGAATCGTCGCAGCCACTCACCAAAATCTTGAAAAACTGGTTCATCAAGGCAAAT
TTCGTGAAGACTTATTCCATCGTCTGAACGTTATTCGCATCCATATCCCGTCACTGCGTGAACGTCGACAAGATATTGAA
AAGCTCACTAAGCACTTTTTAGCGCTGGCAGCCAAAGAGCTCGGAGTGGAGATGAAAACGCTCAACCCGCGCACCGTGGA
TATTCTGACCAAGCTCGATTGGCCGGGTAACGTGCGCCAACTCGAAAACATGTGTCGCTGGCTCACGGTGATGGCAAGTG
GAAGTGAAGTGCTGCCAAGTGATCTTCCTTCCGAATTATTATCAGAAAGGAAAGCCAGCCATTTTGATAATGATATAAGT
TGGCAGAAACAGTTAGAAACATGGGCAAAATCTGCACTGGCCTCCGGTGAAACCGAGTTGCTTGCCTACGCACTCCCAGA
ATTTGAACGTATACTTTTAGAAGCGGCACTTCACCACACCAATGGACATAAACAAGAAGCCGCCAAAGTATTGGGCTGGG
GACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAA

Domains

Predicted by InterProScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-308)

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.662	99.142	0.373
pilR	Pseudomonas aeruginosa PAK	37.419	99.785	0.373