Detailed information NTG0442762

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: HHM66_RS01870
• Genome accession: NZ_CP053074
• Coordinates: 351081..352007 (+)
• Length: 308 a.a.
• NCBI ID: WP_003049687.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 346081..357007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHM66_RS01860 (HHM66_01865)	amiA	347543..349513 (+)	1971	WP_003057820.1	peptide ABC transporter substrate-binding protein	Regulator
HHM66_RS01865 (HHM66_01870)	amiC	349579..351081 (+)	1503	WP_003057826.1	ABC transporter permease	Regulator
HHM66_RS01870 (HHM66_01875)	amiD	351081..352007 (+)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
HHM66_RS01875 (HHM66_01880)	amiE	352016..353086 (+)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
HHM66_RS01880 (HHM66_01885)	amiF	353079..354002 (+)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator
HHM66_RS01885 (HHM66_01890)	-	354030..355016 (-)	987	WP_170078129.1	IS30-like element IS1239 family transposase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34888.93 Da
• Isoelectric Point: 9.2024

>NTDB_id=442762 HHM66_RS01870 WP_003049687.1 351081..352007(+) (amiD) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
METIDKSKFRFVERDSRASEVIDTPAYSYWKSVFRQFFSKKSTIFMLMILVTILLMSFIYPMFANYDFGDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINVTIGVILGAIWGVSKAFDKVMIEIYNVISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRYRDLEYNLASQTLGTPMYKIAIKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRLIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=442762 HHM66_RS01870 WP_003049687.1 351081..352007(+) (amiD) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
ATGGAAACGATTGATAAATCAAAATTTCGATTTGTTGAGCGCGATAGCAGAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTATTGGAAATCCGTATTCCGTCAATTTTTCTCTAAAAAGTCTACTATCTTCATGCTAATGATTTTAGTGACCATCT
TATTGATGAGTTTTATTTACCCAATGTTTGCGAATTATGACTTTGGTGATGTGAGTAATATCAACGATTTCTCGAAACGT
TATATTTGGCCCAACGCCGAATACTGGTTTGGAACAGATAAAAACGGACAATCTTTGTTTGATGGTGTTTGGTATGGAGC
GCGTAATTCTATCTTAATTTCTGTTATAGCAACATTGATTAATGTGACTATCGGAGTTATTTTAGGAGCTATTTGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAGATTTATAATGTCATCTCAAACATTCCTTCAATGTTAATTATCATTGTT
TTGACCTATTCATTAGGTGCTGGTTTTTGGAATTTGATTTTAGCTTTCTGTATCACTGGATGGATCGGTGTAGCTTACTC
TATCCGTGTGCAAATCTTACGTTACCGTGATTTGGAGTACAACCTTGCTAGCCAAACCCTAGGAACACCAATGTACAAAA
TTGCCATTAAGAACCTCTTGCCTCAATTGGTTTCAGTTATCATGACCATGTTGTCACAAATGTTACCAGTGTACGTGTCT
TCTGAGGCTTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACGACTCCAAGCTTAGGGCGTTTGATTGCTAATTATTC
TAGCAACTTAACAACAAATGCTTACCTCTTCTGGATTCCCTTAGTAACGTTGATTTTAGTATCATTACCATTGTATATTG
TCGGACAAAACCTGGCAGATGCCAGCGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.052	100	0.731
amiD	Streptococcus thermophilus LMG 18311	73.052	100	0.731
amiD	Streptococcus thermophilus LMD-9	73.052	100	0.731