Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HKW97_RS14635 Genome accession   NZ_CP053063
Coordinates   3110354..3110761 (-) Length   135 a.a.
NCBI ID   WP_010795389.1    Uniprot ID   -
Organism   Pseudomonas luteola strain JZ42     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3105354..3115761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HKW97_RS14615 (HKW97_14530) - 3106259..3107143 (-) 885 WP_407362178.1 CheR family methyltransferase -
  HKW97_RS14620 (HKW97_14535) - 3107174..3109204 (-) 2031 WP_010795386.1 methyl-accepting chemotaxis protein -
  HKW97_RS14625 (HKW97_14540) - 3109388..3109924 (-) 537 WP_074824906.1 chemotaxis protein CheW -
  HKW97_RS14630 (HKW97_14545) pilH 3109949..3110314 (-) 366 WP_010795388.1 twitching motility response regulator PilH -
  HKW97_RS14635 (HKW97_14550) pilG 3110354..3110761 (-) 408 WP_010795389.1 twitching motility response regulator PilG Regulator
  HKW97_RS14640 (HKW97_14555) gshB 3110991..3111953 (+) 963 WP_407362179.1 glutathione synthase -
  HKW97_RS14645 (HKW97_14560) - 3112061..3112954 (+) 894 WP_407362180.1 energy transducer TonB -
  HKW97_RS14650 (HKW97_14565) - 3113006..3113575 (+) 570 WP_010795392.1 YqgE/AlgH family protein -
  HKW97_RS14655 (HKW97_14570) ruvX 3113576..3114037 (+) 462 WP_125887764.1 Holliday junction resolvase RuvX -
  HKW97_RS14660 (HKW97_14575) pyrR 3114034..3114546 (+) 513 WP_010795394.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HKW97_RS14665 (HKW97_14580) - 3114565..3115542 (+) 978 WP_407362181.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14960.31 Da        Isoelectric Point: 7.2431

>NTDB_id=442644 HKW97_RS14635 WP_010795389.1 3110354..3110761(-) (pilG) [Pseudomonas luteola strain JZ42]
MEQYSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADNHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSDQYLTKPFSKEELIGAIKNHVPNFTPVEHTS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=442644 HKW97_RS14635 WP_010795389.1 3110354..3110761(-) (pilG) [Pseudomonas luteola strain JZ42]
ATGGAACAGTACTCCGAAGGTCTGAAGGTAATGGTAATCGATGATTCGAAAACGATTCGTCGAACCGCCGAGACGCTTCT
CAAGAAAGTAGGCTGCGAAGTTATTACTGCCGTCGATGGATTCGATGCGCTCGCAAAAATTGCGGATAACCATCCCAACA
TCATTTTCGTTGATATCATGATGCCTCGTTTGGACGGTTATCAGACCTGTGCGCTTATCAAGAACAATAGCGCATTCAAA
TCGACGCCGGTCATCATGCTTTCTTCGCGTGACGGCCTCTTTGACAAGGCTAAGGGTCGGATCGTTGGGTCCGATCAATA
CCTGACCAAACCGTTCAGCAAAGAAGAGCTGATCGGCGCAATAAAAAACCATGTGCCTAATTTTACCCCAGTCGAGCATA
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

39.516

91.852

0.363