Detailed information NTG0442636

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: HKW97_RS06940
• Genome accession: NZ_CP053063
• Coordinates: 1484655..1486886 (+)
• Length: 743 a.a.
• NCBI ID: WP_407363103.1
• Uniprot ID: -
• Organism: Pseudomonas luteola strain JZ42
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1479655..1491886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HKW97_RS06915 (HKW97_06870)	-	1479894..1480469 (-)	576	WP_010797710.1	PilZ domain-containing protein	-
HKW97_RS06920 (HKW97_06875)	-	1480711..1481967 (+)	1257	WP_037030120.1	lipoprotein-releasing ABC transporter permease subunit	-
HKW97_RS06925 (HKW97_06880)	lolD	1481960..1482643 (+)	684	WP_239380289.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
HKW97_RS06930 (HKW97_06885)	-	1482678..1483922 (+)	1245	WP_407363102.1	lipoprotein-releasing ABC transporter permease subunit	-
HKW97_RS06935 (HKW97_06890)	lolD	1483915..1484598 (+)	684	WP_219652995.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
HKW97_RS06940 (HKW97_06895)	comA	1484655..1486886 (+)	2232	WP_407363103.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
HKW97_RS06945 (HKW97_06900)	exbB	1486936..1487574 (+)	639	WP_019365918.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
HKW97_RS06950 (HKW97_06905)	-	1487571..1488011 (+)	441	WP_010797717.1	biopolymer transporter ExbD	-
HKW97_RS06955 (HKW97_06910)	lpxK	1488008..1489006 (+)	999	WP_010797718.1	tetraacyldisaccharide 4'-kinase	-
HKW97_RS06960 (HKW97_06915)	-	1489032..1489217 (+)	186	WP_010797719.1	Trm112 family protein	-
HKW97_RS06965 (HKW97_06920)	kdsB	1489214..1489981 (+)	768	WP_407363104.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HKW97_RS06970 (HKW97_06925)	-	1489981..1490460 (+)	480	WP_010797721.1	low molecular weight protein-tyrosine-phosphatase	-
HKW97_RS06975 (HKW97_06930)	murB	1490441..1491466 (+)	1026	WP_219652998.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 80733.49 Da
• Isoelectric Point: 9.4907

>NTDB_id=442636 HKW97_RS06940 WP_407363103.1 1484655..1486886(+) (comA) [Pseudomonas luteola strain JZ42]
MRTGIVAFIAGLLVLRFLPELPDREALVACLIVAFGLMFLPRVYVAGAFLIGFGWACLSAHWALDERLDDGLDGRIVWLE
GTVVGLPELREGSTRFLVEDAQSRRGALPSRIRVSWSNAPAVRSGEQWRLAVELQKPGGLHNLRGMDGEAWMLAHRIGAS
GVVKAGQRLSRQATLDAWRDALRQRLLHLDAFQRNGGLAALVLGDSSGVSTRDWQLLQATGTTHLMVISGQHITLLSGFV
FALIAGLARLGYWPVRIPWFPVACLSALVSAVGYGFLAGFDVPVRRACVMIALITLWRLRFRHLGAWVPVGIALAAVLVA
EPLASLTAGFWLSFIAVGLLIWIFGGRLGQWNPWRSWGRAQWMMAVGLAPVLLALDLPVSLSGPIANLVAVPWVDFLVVP
AALLGTVFLLIIPPLGELLLWCSGATLDGLFAFLGYVSALVPAWQGAWVPAWAVALGMLGVLLWLAPDGVPVRPLAVFLL
IPLFWPPVTRPASGLAKVTVLDVGQGLSVFIQTKGHAMLYDAGPLSGSYDAGERVVVPNLKATGVSHLDMMLISHGDADH
AGGAAAVFSALKVDKVVSGEVKRLPPGLHPTPCEDNQRWVWEGVLFTVWQPSPLMKGNAASCVLMVEAAGERLLLTGDID
EKAERRLVESGRDIRAQWLLAPHHGSRTASSERFVSLVKPEYALISRGIHNNFGHPHAQVISRYERHGVRIYDTALNGAI
SFTLGKHDLPQGARQKRYFWQEK

Nucleotide

• Length: 2232 bp

>NTDB_id=442636 HKW97_RS06940 WP_407363103.1 1484655..1486886(+) (comA) [Pseudomonas luteola strain JZ42]
ATGCGCACAGGGATCGTTGCGTTCATTGCAGGCCTATTGGTGCTGCGCTTTCTACCCGAATTGCCTGATCGAGAGGCTCT
TGTTGCCTGCTTGATAGTGGCATTCGGTCTGATGTTCCTGCCCCGTGTCTACGTGGCAGGTGCCTTCTTGATAGGCTTTG
GCTGGGCCTGTCTGTCGGCTCATTGGGCGCTGGATGAGCGACTGGATGATGGTCTGGACGGAAGAATAGTCTGGCTTGAG
GGAACAGTTGTAGGGCTTCCTGAATTGCGCGAAGGTTCGACGCGTTTTCTTGTGGAAGATGCGCAGAGCCGTCGAGGGGC
TTTACCAAGCCGTATCCGGGTCTCCTGGTCAAATGCGCCTGCCGTACGATCAGGTGAGCAATGGCGTCTCGCTGTAGAGT
TGCAAAAGCCGGGCGGGCTCCACAATCTCCGGGGAATGGATGGCGAAGCCTGGATGCTGGCTCATCGAATCGGTGCAAGC
GGTGTCGTTAAGGCAGGGCAACGACTTTCCCGTCAGGCCACCTTGGATGCCTGGCGAGACGCATTAAGGCAGCGGCTATT
GCATCTTGACGCCTTTCAGCGAAACGGTGGGCTGGCTGCATTGGTTCTGGGCGACAGCTCAGGCGTTTCGACTCGGGATT
GGCAGCTTTTACAGGCCACAGGCACTACGCATCTGATGGTTATTTCCGGTCAGCACATTACGCTGCTTTCGGGATTTGTA
TTTGCGCTGATCGCCGGATTGGCGCGTCTGGGCTACTGGCCTGTCCGGATACCGTGGTTTCCTGTTGCTTGCCTGTCTGC
GCTTGTATCGGCGGTAGGATACGGATTTCTGGCAGGCTTTGACGTTCCTGTAAGACGAGCCTGCGTCATGATCGCGCTGA
TTACACTATGGCGATTACGGTTTCGTCACCTGGGGGCATGGGTACCGGTAGGTATTGCCTTGGCGGCTGTGCTGGTGGCT
GAGCCGCTGGCAAGCCTTACGGCAGGCTTTTGGTTGTCTTTTATCGCTGTAGGTCTCTTGATATGGATCTTTGGCGGCCG
TTTGGGTCAATGGAATCCTTGGCGCAGTTGGGGGCGGGCCCAATGGATGATGGCAGTCGGGCTAGCGCCGGTTTTACTGG
CTCTGGATCTGCCTGTCAGTCTGTCGGGGCCGATCGCTAACCTTGTTGCCGTGCCTTGGGTAGACTTTTTAGTGGTGCCA
GCCGCCTTGCTGGGTACCGTGTTTCTTCTGATCATTCCTCCCCTAGGCGAGTTGCTACTGTGGTGTTCAGGCGCGACCCT
TGATGGTTTATTCGCATTTCTCGGGTACGTGTCGGCACTGGTTCCTGCGTGGCAGGGAGCATGGGTGCCTGCGTGGGCTG
TCGCTTTAGGCATGCTGGGTGTGTTGCTATGGCTGGCTCCCGATGGGGTGCCGGTCAGGCCTTTGGCAGTATTTCTGCTG
ATTCCGTTGTTCTGGCCGCCAGTGACCCGACCAGCGTCAGGACTGGCAAAGGTAACCGTGCTCGACGTCGGACAGGGGTT
GTCTGTATTCATACAGACCAAAGGCCACGCCATGCTATACGACGCTGGGCCGCTTAGCGGAAGCTATGATGCTGGCGAAA
GGGTGGTAGTCCCCAACCTGAAAGCTACAGGCGTCAGTCATCTAGACATGATGTTGATCAGTCATGGGGATGCAGATCAT
GCAGGAGGCGCCGCTGCTGTTTTCAGCGCCTTGAAGGTGGACAAGGTGGTGAGCGGGGAAGTGAAGCGGCTTCCTCCTGG
CTTGCATCCGACACCCTGCGAAGATAATCAGCGCTGGGTGTGGGAGGGAGTCTTATTTACTGTCTGGCAGCCTAGCCCCT
TGATGAAGGGAAACGCTGCATCGTGCGTGCTGATGGTAGAAGCAGCAGGCGAGCGCCTTTTGCTAACCGGTGATATAGAC
GAAAAGGCCGAGCGTCGCCTCGTTGAATCTGGGCGGGATATACGGGCTCAATGGTTATTGGCACCTCATCATGGCAGTCG
AACGGCTTCGAGCGAGCGTTTCGTCAGTCTGGTAAAACCTGAATATGCCTTGATCTCGAGGGGAATTCACAACAACTTTG
GCCATCCACATGCACAAGTGATCAGTCGTTATGAACGTCATGGCGTCCGGATTTACGATACAGCCTTGAACGGTGCAATA
TCATTTACCCTCGGTAAGCATGATTTGCCGCAAGGCGCTCGTCAGAAGCGTTATTTCTGGCAAGAAAAATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (27-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (502-686)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	55.571	95.424	0.53