Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HKW99_RS18115 Genome accession   NZ_CP053061
Coordinates   3881350..3881757 (-) Length   135 a.a.
NCBI ID   WP_019339789.1    Uniprot ID   A0A653VR38
Organism   Stutzerimonas zhaodongensis strain JZ60     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3876350..3886757
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HKW99_RS18095 (HKW99_18020) - 3877313..3878179 (-) 867 WP_407293167.1 protein-glutamate O-methyltransferase -
  HKW99_RS18100 (HKW99_18025) - 3878239..3880287 (-) 2049 WP_407293170.1 methyl-accepting chemotaxis protein -
  HKW99_RS18105 (HKW99_18030) - 3880366..3880902 (-) 537 WP_407293173.1 chemotaxis protein CheW -
  HKW99_RS18110 (HKW99_18035) pilH 3880940..3881305 (-) 366 WP_407293174.1 twitching motility response regulator PilH -
  HKW99_RS18115 (HKW99_18040) pilG 3881350..3881757 (-) 408 WP_019339789.1 twitching motility response regulator PilG Regulator
  HKW99_RS18120 (HKW99_18045) gshB 3881996..3882958 (+) 963 WP_407293177.1 glutathione synthase -
  HKW99_RS18125 (HKW99_18050) - 3883119..3884015 (+) 897 WP_407293179.1 energy transducer TonB -
  HKW99_RS18130 (HKW99_18055) - 3884095..3884664 (+) 570 WP_407293182.1 YqgE/AlgH family protein -
  HKW99_RS18135 (HKW99_18060) ruvX 3884661..3885089 (+) 429 WP_407293185.1 Holliday junction resolvase RuvX -
  HKW99_RS18140 (HKW99_18065) pyrR 3885109..3885621 (+) 513 WP_407293187.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HKW99_RS18145 (HKW99_18070) - 3885632..3886648 (+) 1017 WP_407293190.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14840.24 Da        Isoelectric Point: 7.2439

>NTDB_id=442612 HKW99_RS18115 WP_019339789.1 3881350..3881757(-) (pilG) [Stutzerimonas zhaodongensis strain JZ60]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADSHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=442612 HKW99_RS18115 WP_019339789.1 3881350..3881757(-) (pilG) [Stutzerimonas zhaodongensis strain JZ60]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACGCTGCT
GAAAAAAGTAGGTTGTGACGTGATCACGGCGGTGGATGGCTTCGACGCGCTCGCCAAGATTGCAGATAGTCACCCGCGCA
TCATCTTCGTCGATATCATGATGCCTAGGCTTGATGGGTATCAGACTTGCGCGCTGATAAAGAACAACAGTTCGTTCAAG
TCCACCCCAGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAAGCCAAGGGGCGGATCGTGGGGTCGGATCAGTA
CCTCACCAAGCCGTTCAGTAAAGAAGAGTTGCTCGGTGCTATCAAGGCTCACGTGCCTGATTTTGCGCCGGTAGAGCAAG
TATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A653VR38

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385