Detailed information NTG0442595

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: HKW99_RS06495
• Genome accession: NZ_CP053061
• Coordinates: 1366923..1369148 (+)
• Length: 741 a.a.
• NCBI ID: WP_407296292.1
• Uniprot ID: -
• Organism: Stutzerimonas zhaodongensis strain JZ60
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1361923..1374148

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HKW99_RS06465 (HKW99_06450)	-	1362056..1362343 (-)	288	WP_407296281.1	phosphodiesterase	-
HKW99_RS06470 (HKW99_06455)	-	1362347..1362919 (-)	573	WP_407296283.1	PilZ domain-containing protein	-
HKW99_RS06475 (HKW99_06460)	-	1363017..1364264 (+)	1248	WP_407296286.1	lipoprotein-releasing ABC transporter permease subunit	-
HKW99_RS06480 (HKW99_06465)	lolD	1364272..1364970 (+)	699	WP_407297704.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
HKW99_RS06485 (HKW99_06470)	-	1364970..1366217 (+)	1248	WP_407296288.1	lipoprotein-releasing ABC transporter permease subunit	-
HKW99_RS06490 (HKW99_06475)	-	1366226..1366741 (-)	516	WP_407296290.1	DUF2062 domain-containing protein	-
HKW99_RS06495 (HKW99_06480)	comA	1366923..1369148 (+)	2226	WP_407296292.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
HKW99_RS06500 (HKW99_06485)	-	1369220..1369852 (+)	633	WP_407296293.1	MotA/TolQ/ExbB proton channel family protein	-
HKW99_RS06505 (HKW99_06490)	-	1369849..1370277 (+)	429	WP_407296296.1	ExbD/TolR family protein	-
HKW99_RS06510 (HKW99_06495)	lpxK	1370277..1371272 (+)	996	WP_407296298.1	tetraacyldisaccharide 4'-kinase	-
HKW99_RS06515 (HKW99_06500)	-	1371322..1371507 (+)	186	WP_407296300.1	Trm112 family protein	-
HKW99_RS06520 (HKW99_06505)	kdsB	1371504..1372268 (+)	765	WP_407296302.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HKW99_RS06525 (HKW99_06510)	-	1372271..1372735 (+)	465	WP_407296304.1	low molecular weight protein-tyrosine-phosphatase	-
HKW99_RS06530 (HKW99_06515)	murB	1372732..1373751 (+)	1020	WP_407296306.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80309.10 Da
• Isoelectric Point: 8.9581

>NTDB_id=442595 HKW99_RS06495 WP_407296292.1 1366923..1369148(+) (comA) [Stutzerimonas zhaodongensis strain JZ60]
MRAAMLALAAGLLLLRFLPQLPPVWVLPFMFAAGLASILLRWRVAGCFLVGFGWACLCAHGALDDRLPAEFDGRTFWLEG
TVAGLPDVQVGVVRFELVDISSRHDGLPSRIRLSWYRGPALQAGERWRLAAKLKMPRGLVNPNSFDYEAWLLARRIGATG
TVKAGERISVADGRPAWRDQLRQRLLTVDAYGRSGAIAALVVGDDSGLSTSDWRLLQDTGTVHLMVISGQHVGMLAGLLY
GLVALMARWGLWPPRLAWLPSACVLALTGAFAYGWLAGFEVPVQRALVMVALVLLWRLRFRHLGVWLPLLIAMNGVLLLD
PLVGLQSGFWLSFAAVALLALIFRGRLGAWGWWHTLGRAQWTMALGLLPVMLALGLPVSLSGPIANLFAVPLVSLLIVPL
SLLGTVLLSVPSVGEPLLTAAGWLLMVLFDALRWLADWQPAWIPFSLPPWAWLLVAVGVLLVLLPSGVPFRALGLVLLLP
LLFPPVSRPATGQAEVWVFDVGQGLSVLVRTREHALLYDAGPRYGDVDIGERVVSPSLRALGLADLDLMILSHADNDHAG
GALAIARSMPVTRTLSGEPQAVAASLNAEACRSGDSWDWDGVRFTLWQWAKARGGNPSSCVLLVEANGERLLLTGDIDTA
AEEALVASGIPLKVQWLLVPHHGSRSSSSTAFIEATTAGGALVSRGLHNAYGHPHPDVVRRLEASGAAIHDTAEQGALQI
HLGRFESLRGLREERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=442595 HKW99_RS06495 WP_407296292.1 1366923..1369148(+) (comA) [Stutzerimonas zhaodongensis strain JZ60]
ATGCGTGCAGCGATGCTAGCGCTGGCAGCAGGCCTGTTACTGCTGCGCTTTCTACCGCAACTGCCACCCGTTTGGGTGCT
GCCGTTCATGTTTGCCGCGGGACTGGCATCGATACTGTTGCGATGGCGAGTGGCTGGGTGTTTTCTCGTTGGCTTTGGAT
GGGCCTGTTTGTGTGCCCATGGCGCGCTAGACGATCGCCTTCCTGCCGAGTTCGATGGCCGGACGTTTTGGCTTGAAGGG
ACGGTCGCTGGCCTCCCAGACGTCCAGGTTGGTGTAGTGCGTTTCGAGCTCGTGGATATATCGTCTCGGCACGACGGGCT
TCCCTCCAGGATACGTTTGAGTTGGTATCGCGGGCCGGCGCTACAGGCCGGAGAACGCTGGCGACTCGCGGCCAAACTCA
AAATGCCACGGGGCTTGGTCAATCCGAACTCATTCGACTACGAGGCCTGGCTTCTGGCTCGCCGGATTGGCGCCACCGGC
ACAGTCAAGGCCGGAGAGCGTATCTCGGTGGCGGACGGCAGGCCGGCGTGGCGCGATCAGTTGCGACAACGCTTGCTGAC
GGTGGACGCCTATGGCCGCTCTGGTGCGATTGCTGCGCTGGTGGTTGGTGATGATAGCGGCCTGTCCACCTCCGATTGGC
GTCTTCTTCAAGACACTGGAACCGTGCATCTGATGGTGATATCCGGTCAGCACGTGGGCATGCTTGCCGGCTTGCTTTAT
GGCCTCGTTGCCCTGATGGCGCGCTGGGGGCTGTGGCCGCCTCGCCTGGCCTGGTTGCCTTCTGCCTGTGTTCTAGCGCT
CACTGGCGCGTTTGCCTACGGTTGGCTGGCGGGTTTCGAAGTGCCTGTCCAAAGGGCACTGGTAATGGTCGCTCTGGTGC
TCTTGTGGCGCTTGCGGTTTCGCCACCTCGGTGTGTGGCTACCATTGCTGATCGCGATGAACGGCGTCCTGCTGCTCGAC
CCGCTGGTAGGGCTTCAGTCGGGGTTCTGGTTGTCGTTTGCTGCTGTGGCGTTACTTGCACTGATTTTTCGGGGCAGGCT
CGGAGCGTGGGGCTGGTGGCATACTCTGGGCCGCGCCCAGTGGACCATGGCCCTTGGGCTCTTGCCCGTCATGCTTGCGC
TGGGGTTGCCGGTAAGTCTGAGTGGGCCGATCGCCAACCTGTTTGCAGTGCCCTTGGTGAGCTTGCTGATCGTCCCACTG
TCGTTACTGGGCACCGTCCTGTTATCAGTCCCTAGCGTAGGCGAACCGCTGTTAACGGCGGCAGGCTGGTTGCTGATGGT
GCTGTTCGATGCGCTTCGATGGCTTGCTGACTGGCAACCGGCATGGATTCCGTTCTCACTTCCTCCATGGGCCTGGCTGC
TGGTTGCAGTGGGTGTGTTGCTGGTTTTGCTGCCGTCCGGGGTCCCGTTTCGGGCGCTGGGACTGGTCCTTCTGCTGCCT
TTGCTGTTCCCACCTGTAAGCAGGCCTGCAACGGGTCAAGCGGAAGTATGGGTGTTCGATGTGGGGCAGGGGTTATCCGT
GTTGGTGCGCACGCGTGAGCACGCGCTCCTCTACGACGCGGGGCCGCGCTATGGTGACGTCGACATCGGCGAACGGGTCG
TGTCGCCGTCTCTGCGGGCGCTGGGCTTGGCAGACCTGGATTTGATGATTCTTAGCCATGCCGATAACGACCATGCCGGT
GGCGCTTTGGCGATTGCGCGAAGCATGCCTGTTACACGAACGCTCAGCGGTGAGCCGCAAGCCGTTGCTGCATCGTTGAA
TGCTGAGGCCTGCCGCTCCGGAGACAGCTGGGATTGGGATGGCGTCAGGTTTACGCTTTGGCAATGGGCTAAAGCCCGAG
GCGGAAATCCATCCTCCTGCGTGCTTCTGGTTGAGGCGAACGGCGAACGACTGCTGCTCACCGGTGATATCGACACAGCC
GCAGAAGAAGCATTAGTGGCAAGCGGCATACCGCTCAAAGTCCAGTGGCTGCTCGTACCGCATCACGGCAGCCGTAGCTC
GTCTTCAACCGCCTTTATCGAGGCTACAACGGCTGGCGGTGCGCTTGTTTCTCGAGGCTTGCATAACGCTTACGGACATC
CCCATCCGGACGTGGTACGACGTCTGGAAGCGTCTGGCGCAGCGATTCATGACACTGCGGAACAGGGGGCGCTGCAGATC
CATCTCGGCCGTTTCGAGTCCTTGCGAGGATTACGCGAAGAACGCCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	69.35	95.547	0.663
comA	Ralstonia pseudosolanacearum GMI1000	35.511	100	0.404