Detailed information NTG0442204

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: IRJ28_RS10850
• Genome accession: NZ_CP064096
• Coordinates: 2065543..2066568 (-)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis strain N1142-3at
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2060543..2071568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRJ28_RS10815	-	2061028..2061924 (-)	897	WP_003232206.1	2-dehydropantoate 2-reductase	-
IRJ28_RS10820	ylbP	2062084..2062566 (+)	483	WP_003244940.1	N-acetyltransferase	-
IRJ28_RS10825	gerR	2062623..2063204 (-)	582	WP_003232210.1	sporulation specific transcriptional regulator GerR	-
IRJ28_RS10830	rpmF	2063350..2063529 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
IRJ28_RS10835	ylbN	2063551..2064069 (-)	519	WP_003232214.1	DUF177 domain-containing protein	-
IRJ28_RS10840	-	2064097..2064282 (+)	186	WP_003232215.1	hypothetical protein	-
IRJ28_RS10845	ylbM	2064279..2065526 (+)	1248	WP_003244707.1	nucleotidyltransferase	-
IRJ28_RS10850	sepM	2065543..2066568 (-)	1026	WP_003245451.1	protease DdcP	Regulator
IRJ28_RS10855	ylbK	2066570..2067352 (-)	783	WP_003232221.1	patatin family protein	-
IRJ28_RS10860	spoVV	2067533..2068759 (+)	1227	WP_003245492.1	dipicolinic acid transporter SpoVV	-
IRJ28_RS10865	coaD	2068770..2069255 (-)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
IRJ28_RS10870	rsmD	2069260..2069814 (-)	555	WP_003232227.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
IRJ28_RS10875	ylbG	2070137..2070409 (-)	273	WP_009967171.1	YlbG family protein	-
IRJ28_RS10880	ylbF	2070464..2070913 (-)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
IRJ28_RS10885	ylbE	2071029..2071268 (-)	240	WP_003232231.1	YlbE-like family protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=442204 IRJ28_RS10850 WP_003245451.1 2065543..2066568(-) (sepM) [Bacillus subtilis strain N1142-3at]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=442204 IRJ28_RS10850 WP_003245451.1 2065543..2066568(-) (sepM) [Bacillus subtilis strain N1142-3at]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402