Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   IRJ28_RS10085 Genome accession   NZ_CP064096
Coordinates   1914035..1915303 (-) Length   422 a.a.
NCBI ID   WP_010886508.1    Uniprot ID   O31754
Organism   Bacillus subtilis strain N1142-3at     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1909035..1920303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ28_RS10080 proS 1912308..1914002 (-) 1695 WP_003231918.1 proline--tRNA ligase -
  IRJ28_RS10085 eeP 1914035..1915303 (-) 1269 WP_010886508.1 RIP metalloprotease RseP Regulator
  IRJ28_RS10090 dxr 1915310..1916461 (-) 1152 WP_003245155.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  IRJ28_RS10095 cdsA 1916523..1917332 (-) 810 WP_003231924.1 phosphatidate cytidylyltransferase -
  IRJ28_RS10100 uppS 1917336..1918118 (-) 783 WP_003231925.1 isoprenyl transferase -
  IRJ28_RS10105 frr 1918249..1918806 (-) 558 WP_003231927.1 ribosome recycling factor -
  IRJ28_RS10110 pyrH 1918808..1919530 (-) 723 WP_003220923.1 UMP kinase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46743.53 Da        Isoelectric Point: 5.0797

>NTDB_id=442196 IRJ28_RS10085 WP_010886508.1 1914035..1915303(-) (eeP) [Bacillus subtilis strain N1142-3at]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDI
VSAVKENPEKEMDVAVKRDNKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIVNLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=442196 IRJ28_RS10085 WP_010886508.1 1914035..1915303(-) (eeP) [Bacillus subtilis strain N1142-3at]
ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTTCCATGAACTGGGCCATTTATTGCT
AGCCCAAAGAGCGGGAATTCTCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAATGAAA
CAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGTTCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAA
CCCGGATACACGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATCAATCAAAAGGAAAAATATCC
GGATGCTTTAGTCATTGAAGTGGAAACAGCGGATCTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG
ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAAGAAGTGCAGATTGCGCCGTATAAT
CGCCAATTTGGTTCCAAACCTGTATGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAGCTTA
CGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGAC
GGGCGGCTGAAGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGTCTTGGACTGACATT
GTCTCCGCTGTAAAAGAAAACCCGGAGAAAGAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT
GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCGGTTCCTATGCGCCGACTGAAAAAGGCGTAC
TCTCAGCGGTTGCTTACGGCGCGACATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAAATTAGTAACA
GGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCATATATGACATGACAGACCAAGTGGCGAAAACAGGGATCGT
GAACTTATTTCAGTTTGCGGCGTTTTTAAGCATTAACCTTGGGATTGTCAACCTGCTTCCGATTCCGGCACTTGACGGAG
GAAGACTGTTGTTTCTATTTATTGAAGCGATTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC
GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGGCTGTTTTTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O31754

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.211

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.344

100

0.398