Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IRJ27_RS10355 Genome accession   NZ_CP064095
Coordinates   2025304..2026098 (+) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain N1303-2Ay     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2020304..2031098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ27_RS10335 walR 2020546..2021253 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  IRJ27_RS10340 walK 2021261..2023096 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  IRJ27_RS10345 walH 2023086..2024453 (+) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  IRJ27_RS10350 walI 2024440..2025282 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  IRJ27_RS10355 vicX 2025304..2026098 (+) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  IRJ27_RS10360 htrA 2026180..2027382 (+) 1203 WP_009969578.1 serine protease HtrC Regulator
  IRJ27_RS10365 - 2027402..2027530 (+) 129 WP_003242634.1 hypothetical protein -
  IRJ27_RS10370 - 2027647..2027835 (+) 189 Protein_1988 ATP-binding protein -
  IRJ27_RS10375 rocR 2027817..2029202 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  IRJ27_RS10380 rocD 2029443..2030648 (+) 1206 WP_003242970.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=442064 IRJ27_RS10355 WP_003242676.1 2025304..2026098(+) (vicX) [Bacillus subtilis strain N1303-2Ay]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=442064 IRJ27_RS10355 WP_003242676.1 2025304..2026098(+) (vicX) [Bacillus subtilis strain N1303-2Ay]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53