Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   IRJ26_RS07515 Genome accession   NZ_CP064094
Coordinates   1428026..1428853 (-) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis strain N1108-5at     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1423026..1433853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ26_RS07490 abrB 1425372..1425662 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  IRJ26_RS07495 rsmI 1425711..1426589 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  IRJ26_RS07500 yazA 1426564..1426863 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  IRJ26_RS07505 trmNF 1426850..1427593 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  IRJ26_RS07510 yabA 1427652..1428011 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  IRJ26_RS07515 yaaT 1428026..1428853 (-) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  IRJ26_RS07520 holB 1428856..1429845 (-) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  IRJ26_RS07525 yaaR 1429857..1430297 (-) 441 WP_009966249.1 YaaR family protein -
  IRJ26_RS07530 darA 1430310..1430639 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  IRJ26_RS07535 tmk 1430713..1431351 (-) 639 WP_003243137.1 dTMP kinase -
  IRJ26_RS07540 yaaO 1431348..1432790 (-) 1443 WP_003243352.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=441881 IRJ26_RS07515 WP_003243571.1 1428026..1428853(-) (yaaT) [Bacillus subtilis strain N1108-5at]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=441881 IRJ26_RS07515 WP_003243571.1 1428026..1428853(-) (yaaT) [Bacillus subtilis strain N1108-5at]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1