Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HKK55_RS23615 Genome accession   NZ_CP052859
Coordinates   5208185..5208592 (-) Length   135 a.a.
NCBI ID   WP_155583730.1    Uniprot ID   -
Organism   Pseudomonas sp. ADAK18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5203185..5213592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HKK55_RS23600 (HKK55_23600) - 5205170..5207224 (-) 2055 WP_169356812.1 methyl-accepting chemotaxis protein -
  HKK55_RS23605 (HKK55_23605) - 5207221..5207760 (-) 540 WP_169356813.1 chemotaxis protein CheW -
  HKK55_RS23610 (HKK55_23610) pilH 5207773..5208138 (-) 366 WP_169356814.1 twitching motility response regulator PilH -
  HKK55_RS23615 (HKK55_23615) pilG 5208185..5208592 (-) 408 WP_155583730.1 twitching motility response regulator PilG Regulator
  HKK55_RS23620 (HKK55_23620) gshB 5208831..5209784 (+) 954 WP_169356815.1 glutathione synthase -
  HKK55_RS23625 (HKK55_23625) - 5209862..5210761 (+) 900 WP_169356816.1 energy transducer TonB -
  HKK55_RS23630 (HKK55_23630) - 5210829..5211398 (+) 570 WP_169356817.1 YqgE/AlgH family protein -
  HKK55_RS23635 (HKK55_23635) ruvX 5211398..5211835 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  HKK55_RS23640 (HKK55_23640) pyrR 5211919..5212425 (+) 507 WP_169356818.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HKK55_RS23645 (HKK55_23645) - 5212450..5213454 (+) 1005 WP_169356819.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14882.37 Da        Isoelectric Point: 7.3839

>NTDB_id=441843 HKK55_RS23615 WP_155583730.1 5208185..5208592(-) (pilG) [Pseudomonas sp. ADAK18]
MEQHSNALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=441843 HKK55_RS23615 WP_155583730.1 5208185..5208592(-) (pilG) [Pseudomonas sp. ADAK18]
ATGGAACAGCATTCCAACGCCTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGCCGCACCGCCGAGACACTGTT
GAAGAACGTAGGGTGCGAAGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCAAGATCGTTGACCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGTTATCAGACCTGCGCCTTGGTCAAGAACAACCCGGCGTTCAAG
TCGATACCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCTGATCAGTT
TTTGACCAAACCTTTTAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCGTATGTGCCGGGCTTCGCCGCAGTAGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.6

92.593

0.681
  vicR Streptococcus mutans UA159

39.683

93.333

0.37