Detailed information NTG0441789

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: IRJ24_RS19315
• Genome accession: NZ_CP064093
• Coordinates: 3696050..3697075 (-)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis strain N1282-4at
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 3691050..3702075

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRJ24_RS19280	-	3691535..3692431 (-)	897	WP_003232206.1	2-dehydropantoate 2-reductase	-
IRJ24_RS19285	ylbP	3692591..3693073 (+)	483	WP_003244940.1	N-acetyltransferase	-
IRJ24_RS19290	gerR	3693130..3693711 (-)	582	WP_003232210.1	sporulation specific transcriptional regulator GerR	-
IRJ24_RS19295	rpmF	3693857..3694036 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
IRJ24_RS19300	ylbN	3694058..3694576 (-)	519	WP_003232214.1	DUF177 domain-containing protein	-
IRJ24_RS19305	-	3694604..3694789 (+)	186	WP_003232215.1	hypothetical protein	-
IRJ24_RS19310	ylbM	3694786..3696033 (+)	1248	WP_003244707.1	nucleotidyltransferase	-
IRJ24_RS19315	sepM	3696050..3697075 (-)	1026	WP_003245451.1	protease DdcP	Regulator
IRJ24_RS19320	ylbK	3697077..3697859 (-)	783	WP_003232221.1	patatin family protein	-
IRJ24_RS19325	spoVV	3698040..3699266 (+)	1227	WP_003245492.1	dipicolinic acid transporter SpoVV	-
IRJ24_RS19330	coaD	3699277..3699762 (-)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
IRJ24_RS19335	rsmD	3699767..3700321 (-)	555	WP_003232227.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
IRJ24_RS19340	ylbG	3700644..3700916 (-)	273	WP_009967171.1	YlbG family protein	-
IRJ24_RS19345	ylbF	3700971..3701420 (-)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
IRJ24_RS19350	ylbE	3701536..3701775 (-)	240	WP_003232231.1	YlbE-like family protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=441789 IRJ24_RS19315 WP_003245451.1 3696050..3697075(-) (sepM) [Bacillus subtilis strain N1282-4at]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=441789 IRJ24_RS19315 WP_003245451.1 3696050..3697075(-) (sepM) [Bacillus subtilis strain N1282-4at]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402