Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IRJ24_RS05870 Genome accession   NZ_CP064093
Coordinates   1120174..1120968 (+) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain N1282-4at     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1115174..1125968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ24_RS05850 walR 1115416..1116123 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  IRJ24_RS05855 walK 1116131..1117966 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  IRJ24_RS05860 walH 1117956..1119323 (+) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  IRJ24_RS05865 walI 1119310..1120152 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  IRJ24_RS05870 vicX 1120174..1120968 (+) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  IRJ24_RS05875 htrA 1121050..1122252 (+) 1203 WP_009969578.1 serine protease HtrC Regulator
  IRJ24_RS05880 - 1122272..1122400 (+) 129 WP_003242634.1 hypothetical protein -
  IRJ24_RS05885 - 1122517..1122705 (+) 189 Protein_1089 ATP-binding protein -
  IRJ24_RS05890 rocR 1122687..1124072 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  IRJ24_RS05895 rocD 1124313..1125518 (+) 1206 WP_003242970.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=441704 IRJ24_RS05870 WP_003242676.1 1120174..1120968(+) (vicX) [Bacillus subtilis strain N1282-4at]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=441704 IRJ24_RS05870 WP_003242676.1 1120174..1120968(+) (vicX) [Bacillus subtilis strain N1282-4at]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53