Detailed information NTG0441602

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HHA24_RS19425
• Genome accession: NZ_CP052845
• Coordinates: 4080551..4081729 (-)
• Length: 392 a.a.
• NCBI ID: WP_032961144.1
• Uniprot ID: -
• Organism: Bordetella hinzii strain 2B3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4075551..4086729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHA24_RS19405 (HHA24_19400)	phnC	4076330..4077100 (+)	771	WP_029578354.1	phosphonate ABC transporter ATP-binding protein	-
HHA24_RS19410 (HHA24_19405)	phnE	4077088..4077951 (+)	864	WP_029578353.1	phosphonate ABC transporter, permease protein PhnE	-
HHA24_RS19415 (HHA24_19410)	phnE	4077948..4078769 (+)	822	WP_029578352.1	phosphonate ABC transporter, permease protein PhnE	-
HHA24_RS19420 (HHA24_19415)	-	4078957..4080540 (+)	1584	WP_032961477.1	CYTH and CHAD domain-containing protein	-
HHA24_RS19425 (HHA24_19420)	pilA	4080551..4081729 (-)	1179	WP_032961144.1	signal recognition particle-docking protein FtsY	Machinery gene
HHA24_RS19430 (HHA24_19425)	rsmD	4081802..4082422 (+)	621	WP_185843224.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HHA24_RS19435 (HHA24_19430)	coaD	4082446..4082958 (+)	513	WP_029578348.1	pantetheine-phosphate adenylyltransferase	-
HHA24_RS19440 (HHA24_19435)	-	4083029..4083283 (+)	255	WP_029578347.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HHA24_RS19445 (HHA24_19440)	-	4083280..4084491 (+)	1212	WP_032961141.1	benzoate/H(+) symporter BenE family transporter	-
HHA24_RS19450 (HHA24_19445)	-	4084488..4084871 (-)	384	WP_029578345.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 40735.93 Da
• Isoelectric Point: 5.8139

>NTDB_id=441602 HHA24_RS19425 WP_032961144.1 4080551..4081729(-) (pilA) [Bordetella hinzii strain 2B3]
MFSFFKKKTPPPAAPATPAPPPEPVVQPAEPVPPPADPSPVDAAPVEPIPAQAAPLEPAAVEPAPVAPPPVPPQAAPEPV
SEPAAAAPKKASWLSRLKQGLARTGQSLGGIFVGVKVDENLFEELESALIMADAGMEATDKLLTALRARVKKERIEDPAQ
VKAALRQLLAEHLKPLERGFDLRRSQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLIEWGSR
NNVTVIAQEGGDPAAVAFDAVNAGRARGAGVVMIDTAGRLPTQLHLMEELKKIRRVIGKADAAAPHEVLLVVDGNTGQNA
LAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGEGLEDLQPFVAEEFATALLAD

Nucleotide

• Length: 1179 bp

>NTDB_id=441602 HHA24_RS19425 WP_032961144.1 4080551..4081729(-) (pilA) [Bordetella hinzii strain 2B3]
ATGTTCAGCTTCTTCAAGAAAAAGACCCCTCCGCCCGCCGCGCCGGCCACGCCCGCGCCGCCGCCGGAGCCCGTCGTCCA
GCCGGCCGAGCCCGTCCCGCCGCCGGCTGACCCGTCCCCCGTTGATGCGGCCCCCGTTGAGCCGATTCCTGCTCAAGCGG
CTCCCCTTGAACCGGCGGCCGTCGAACCGGCGCCTGTCGCCCCGCCGCCCGTGCCCCCGCAGGCCGCGCCCGAGCCGGTA
TCCGAGCCGGCCGCCGCCGCGCCCAAGAAGGCGTCCTGGCTCAGCCGGCTCAAGCAGGGGCTGGCGCGCACCGGCCAGAG
CCTCGGCGGCATTTTCGTCGGCGTCAAAGTCGACGAAAACCTGTTCGAGGAGCTGGAGTCGGCCCTCATCATGGCCGATG
CGGGCATGGAGGCCACCGATAAACTGCTCACGGCCCTGCGCGCCCGCGTCAAGAAAGAACGCATCGAGGATCCCGCCCAG
GTCAAGGCGGCGCTGCGCCAATTGCTGGCCGAGCACCTCAAGCCGCTGGAGCGCGGCTTCGACCTGCGGCGCAGCCAGCC
CCTGGTGGTGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGCAAACTGGCCCACACCTTCCAGCGCC
AGGGCGCCAGCGTGCTGCTGGCCGCGGGCGACACCTTCCGCGCCGCGGCGCGCGAGCAACTGATCGAATGGGGCAGCCGC
AACAACGTCACCGTCATCGCCCAGGAGGGTGGCGACCCGGCGGCGGTGGCGTTTGACGCCGTCAACGCGGGCCGCGCGCG
CGGCGCCGGCGTGGTCATGATAGACACCGCGGGGCGCCTGCCGACACAGCTGCACCTGATGGAAGAGCTCAAGAAAATCC
GCCGCGTCATCGGCAAGGCCGATGCGGCCGCGCCCCATGAAGTGCTGTTGGTGGTCGACGGCAATACGGGCCAGAACGCG
CTGGCCCAGATCCGCGCCTTTGACGCCGCCATCCAGCTCACCGGCCTGGTGGTGACCAAGCTGGACGGCACCGCCAAGGG
CGGCACGCTGGCCGCGGTCGCGGCCGGCAGCCAGGGCGTGCGCCCCGTGCCGGTCTATTGGATCGGCGTGGGCGAGGGGC
TCGAAGACCTGCAGCCCTTCGTGGCCGAGGAGTTCGCCACCGCGCTGTTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (106-167)

• SRP54-type protein, GTPase domain (SRP54) (188-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.762	100	0.533