Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   IRJ22_RS05345 Genome accession   NZ_CP064092
Coordinates   1023961..1024584 (-) Length   207 a.a.
NCBI ID   WP_003182222.1    Uniprot ID   Q65J42
Organism   Bacillus licheniformis strain C5     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1018961..1029584
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ22_RS05315 wrbA 1019329..1019940 (+) 612 WP_003182210.1 NAD(P)H:quinone oxidoreductase -
  IRJ22_RS05320 - 1020261..1020401 (+) 141 WP_003182211.1 hypothetical protein -
  IRJ22_RS05325 - 1020394..1021227 (+) 834 WP_003182213.1 prohibitin family protein -
  IRJ22_RS05330 - 1021318..1022079 (+) 762 WP_003182215.1 hypothetical protein -
  IRJ22_RS05335 - 1022139..1022978 (+) 840 WP_003182218.1 thymidylate synthase -
  IRJ22_RS05340 nucA/comI 1023337..1023765 (+) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  IRJ22_RS05345 dinR/lexA 1023961..1024584 (-) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  IRJ22_RS05350 yneA 1024737..1025048 (+) 312 WP_161658308.1 cell division suppressor protein YneA -
  IRJ22_RS05355 - 1025067..1025714 (+) 648 WP_003182227.1 YneB family resolvase-like protein -
  IRJ22_RS05360 - 1025780..1026013 (+) 234 WP_003182231.1 DUF896 domain-containing protein -
  IRJ22_RS05365 recP/tkt 1026180..1028183 (+) 2004 WP_095240068.1 transketolase Machinery gene
  IRJ22_RS05370 sirA 1028338..1028775 (+) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  IRJ22_RS05375 - 1028860..1029078 (+) 219 WP_003182236.1 YneF family protein -
  IRJ22_RS05380 - 1029159..1029320 (-) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23263.85 Da        Isoelectric Point: 5.3807

>NTDB_id=441567 IRJ22_RS05345 WP_003182222.1 1023961..1024584(-) (dinR/lexA) [Bacillus licheniformis strain C5]
MTKLSKRQLDILRFIKEEVKRKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDTEEEIHIPKN
QVVNVPVIGKVTAGTPITAVENIEEYFPLPERLAPPDEHVFMLEIMGESMIDAGILDQDYVIVKQQNTANNGDIVVAMTE
DDEATVKRFFKEETHIRLQPENPTMEPIILQNVTILGKVIGVFRTVH

Nucleotide


Download         Length: 624 bp        

>NTDB_id=441567 IRJ22_RS05345 WP_003182222.1 1023961..1024584(-) (dinR/lexA) [Bacillus licheniformis strain C5]
ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGAAGAAGTGAAGCGCAAAGGCTATCCGCCTTC
CGTCAGGGAGATCGGAGAAGCGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTTGAAACGAAGG
GATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCGAAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAAC
CAGGTTGTCAATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGTCGAAAACATCGAGGAATACTT
TCCGCTTCCCGAACGCCTGGCGCCGCCGGATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCCG
GAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAACAACGGGGATATCGTCGTTGCGATGACCGAA
GACGACGAAGCGACTGTTAAGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCGACGATGGAGCC
GATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCATCGGCGTTTTCCGCACTGTTCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-200)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65J42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913