Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | HHK01_RS00220 | Genome accession | NZ_CP052135 |
| Coordinates | 44315..46759 (+) | Length | 814 a.a. |
| NCBI ID | WP_170005882.1 | Uniprot ID | - |
| Organism | Bacillus fonticola strain CS13 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39315..51759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHK01_RS00200 | - | 41198..41923 (-) | 726 | WP_170005878.1 | DsbA family oxidoreductase | - |
| HHK01_RS00205 | - | 42195..42671 (+) | 477 | WP_170005879.1 | CtsR family transcriptional regulator | - |
| HHK01_RS00210 | - | 42677..43231 (+) | 555 | WP_170005880.1 | UvrB/UvrC motif-containing protein | - |
| HHK01_RS00215 | - | 43231..44301 (+) | 1071 | WP_170005881.1 | protein arginine kinase | - |
| HHK01_RS00220 | clpC | 44315..46759 (+) | 2445 | WP_170005882.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| HHK01_RS00225 | radA | 47093..48466 (+) | 1374 | WP_170005883.1 | DNA repair protein RadA | Machinery gene |
| HHK01_RS00230 | disA | 48518..49561 (+) | 1044 | WP_170008591.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| HHK01_RS00235 | - | 49962..51056 (+) | 1095 | WP_170005884.1 | PIN/TRAM domain-containing protein | - |
Sequence
Protein
Download Length: 814 a.a. Molecular weight: 90328.84 Da Isoelectric Point: 5.9146
>NTDB_id=441426 HHK01_RS00220 WP_170005882.1 44315..46759(+) (clpC) [Bacillus fonticola strain CS13]
MMFGRFTERAQKVLALAQEEAIRLRHSNIGTEHVLLGLVREGEGIAAKALYGLGLNPEKIQKEVEGLIGTGDEKGQNIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEANGGQSGAGSSNAN
TPTLDSLARDLTAVAREGNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIENEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPITVDEPTEEESVQILQGLRDRYEAHHRVSITNEAIEAAVKLSSRYISDRFLPDKAIDLIDEAG
SKVRLKSFTTPPNLKELEMNLGEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGKENSQVTVEDIASV
VSSWTGIPVSKIAQTETDKLLKLEETLHSRVIGQNEAVSAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEFMEKHSTSRLVGSPPGYVGFDEGGQLTEKVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTVLIMTSNVGAEQLKRNKFVGFNVQDEGQQYKDMKGNVMEELKRAFRPEFLNRVDEIIVFHALEKAQL
KQIVSLLSDQLTKRLSEQNISLTLTEVAKDKIAEVGYDPEYGARPLRRALQKHIEDRLSEELLKGKVLTGTNVTVDVEKG
EFIVRTSEEVEQTT
MMFGRFTERAQKVLALAQEEAIRLRHSNIGTEHVLLGLVREGEGIAAKALYGLGLNPEKIQKEVEGLIGTGDEKGQNIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEANGGQSGAGSSNAN
TPTLDSLARDLTAVAREGNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIENEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPITVDEPTEEESVQILQGLRDRYEAHHRVSITNEAIEAAVKLSSRYISDRFLPDKAIDLIDEAG
SKVRLKSFTTPPNLKELEMNLGEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGKENSQVTVEDIASV
VSSWTGIPVSKIAQTETDKLLKLEETLHSRVIGQNEAVSAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEFMEKHSTSRLVGSPPGYVGFDEGGQLTEKVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTVLIMTSNVGAEQLKRNKFVGFNVQDEGQQYKDMKGNVMEELKRAFRPEFLNRVDEIIVFHALEKAQL
KQIVSLLSDQLTKRLSEQNISLTLTEVAKDKIAEVGYDPEYGARPLRRALQKHIEDRLSEELLKGKVLTGTNVTVDVEKG
EFIVRTSEEVEQTT
Nucleotide
Download Length: 2445 bp
>NTDB_id=441426 HHK01_RS00220 WP_170005882.1 44315..46759(+) (clpC) [Bacillus fonticola strain CS13]
ATGATGTTTGGTCGTTTTACAGAACGCGCCCAGAAGGTATTAGCCCTTGCCCAGGAGGAGGCTATTCGTCTCCGACATAG
TAATATTGGAACAGAACATGTTCTTCTCGGACTTGTGCGGGAAGGAGAAGGGATTGCAGCAAAAGCATTGTACGGACTCG
GATTAAACCCTGAGAAGATCCAAAAAGAAGTAGAAGGATTAATCGGTACTGGTGATGAAAAAGGTCAAAACATTCACTAC
ACCCCTCGTGCTAAAAAAGTGATTGAATTATCTATGGATGAAGCACGCAAGCTCGGGCATTCCTATGTCGGCACTGAGCA
CATCCTTCTCGGATTAATTCGTGAAGGAGAAGGGGTCGCTGCTCGTGTGCTAAACAATCTAGGCGTTAGCTTGAATAAAG
CGCGTCAGCAAGTGCTACAGCTATTAGGTAGTAACGAAGCGAATGGAGGCCAGTCAGGTGCAGGTTCCTCAAATGCGAAC
ACGCCAACACTTGATAGTTTAGCTCGTGACCTAACAGCCGTTGCTCGTGAAGGTAACCTGGACCCTGTCATCGGACGTAG
CAAGGAGATCCAACGTGTCATTGAAGTCTTGTCTCGCCGCACAAAAAACAACCCCGTTTTAATCGGTGAGCCTGGTGTCG
GGAAAACCGCCATTGCGGAAGGTTTAGCTCAACAAATTATTGAGAATGAAGTTCCGGAAATTTTACGTGATAAGCGCGTC
ATGACTCTTGATATGGGTACTGTCGTTGCTGGTACGAAATATCGCGGAGAATTTGAAGATCGCTTAAAAAAAGTGATGGA
CGAAATTCGCCAAGCTGGAAATATTATTTTGTTTATCGATGAGCTACACACATTGATTGGAGCAGGTGGAGCAGAAGGGG
CTATTGATGCTTCTAACATTTTAAAGCCATCGCTCGCTCGCGGTGAGTTGCAATGTATCGGTGCGACTACACTCGATGAG
TATCGTAAATATATTGAGAAAGATGCCGCTCTTGAGCGTCGCTTCCAGCCTATTACTGTGGATGAGCCGACAGAAGAAGA
GTCTGTGCAAATTCTACAAGGTCTTCGTGATCGGTATGAGGCACATCATCGTGTGTCTATAACAAACGAAGCCATTGAAG
CAGCCGTGAAATTGTCCAGTCGCTATATTTCCGATCGATTCCTTCCAGACAAAGCGATCGATCTAATTGACGAGGCTGGA
TCGAAAGTGCGACTCAAATCATTTACAACACCACCCAATTTAAAAGAACTAGAAATGAATCTTGGTGAAGTGCGCAAAGA
AAAAGACGCGGCTGTCCAAAGCCAAGAATTTGAGAAGGCGGCTTCGCTTCGTGATACAGAACAACGTCTTCGTGAACAAG
TAGAAGAAACAAAGAAGACATGGAAAGAAAAGCAAGGGAAAGAAAACAGCCAAGTAACTGTTGAGGATATCGCTAGTGTT
GTATCCAGCTGGACGGGTATTCCTGTATCCAAGATCGCTCAAACAGAAACCGACAAGTTGCTAAAATTAGAAGAAACGCT
TCACTCCCGAGTTATCGGACAAAATGAAGCGGTCAGTGCGGTTAGTAAGGCAGTTCGACGTGCGCGTGCTGGTCTAAAAG
ATCCGAAGCGCCCCATCGGTTCGTTTATTTTCTTAGGGCCAACTGGTGTCGGGAAAACTGAGCTGGCTCGTGCGCTAGCG
GAATCGATGTTCGGAGATGAAGACGCGATGATCCGGATCGACATGTCTGAGTTTATGGAGAAACATTCTACGTCTCGTCT
TGTCGGCTCCCCTCCAGGCTATGTCGGTTTTGACGAAGGTGGTCAGTTGACCGAGAAAGTGCGTCGTAAGCCGTATTCGG
TCATTTTGCTAGACGAAGTAGAGAAAGCACATCCAGATGTGTTTAATATTTTGCTTCAAGTACTAGAGGATGGCCGTTTG
ACCGATTCCAAAGGTCGTACGGTTGACTTCCGAAACACGGTACTCATCATGACTTCAAACGTCGGGGCGGAGCAACTGAA
GCGGAACAAGTTTGTCGGCTTTAACGTGCAGGACGAAGGGCAACAGTACAAAGACATGAAGGGGAATGTAATGGAAGAGC
TCAAACGTGCTTTCCGTCCAGAGTTCCTAAACCGTGTCGATGAAATCATTGTCTTCCACGCATTGGAAAAGGCGCAACTG
AAACAAATTGTTTCCTTGCTATCAGATCAATTAACAAAGCGTTTAAGTGAGCAAAACATTAGCTTAACGCTTACTGAAGT
AGCGAAAGACAAAATCGCAGAAGTGGGCTACGATCCAGAGTACGGAGCTAGACCATTACGTCGTGCTCTGCAAAAGCACA
TTGAAGATCGCCTTTCTGAAGAACTTTTGAAAGGGAAAGTGCTGACTGGAACGAACGTCACCGTTGACGTCGAAAAAGGA
GAGTTTATCGTTCGTACGAGTGAAGAGGTTGAGCAAACAACATAA
ATGATGTTTGGTCGTTTTACAGAACGCGCCCAGAAGGTATTAGCCCTTGCCCAGGAGGAGGCTATTCGTCTCCGACATAG
TAATATTGGAACAGAACATGTTCTTCTCGGACTTGTGCGGGAAGGAGAAGGGATTGCAGCAAAAGCATTGTACGGACTCG
GATTAAACCCTGAGAAGATCCAAAAAGAAGTAGAAGGATTAATCGGTACTGGTGATGAAAAAGGTCAAAACATTCACTAC
ACCCCTCGTGCTAAAAAAGTGATTGAATTATCTATGGATGAAGCACGCAAGCTCGGGCATTCCTATGTCGGCACTGAGCA
CATCCTTCTCGGATTAATTCGTGAAGGAGAAGGGGTCGCTGCTCGTGTGCTAAACAATCTAGGCGTTAGCTTGAATAAAG
CGCGTCAGCAAGTGCTACAGCTATTAGGTAGTAACGAAGCGAATGGAGGCCAGTCAGGTGCAGGTTCCTCAAATGCGAAC
ACGCCAACACTTGATAGTTTAGCTCGTGACCTAACAGCCGTTGCTCGTGAAGGTAACCTGGACCCTGTCATCGGACGTAG
CAAGGAGATCCAACGTGTCATTGAAGTCTTGTCTCGCCGCACAAAAAACAACCCCGTTTTAATCGGTGAGCCTGGTGTCG
GGAAAACCGCCATTGCGGAAGGTTTAGCTCAACAAATTATTGAGAATGAAGTTCCGGAAATTTTACGTGATAAGCGCGTC
ATGACTCTTGATATGGGTACTGTCGTTGCTGGTACGAAATATCGCGGAGAATTTGAAGATCGCTTAAAAAAAGTGATGGA
CGAAATTCGCCAAGCTGGAAATATTATTTTGTTTATCGATGAGCTACACACATTGATTGGAGCAGGTGGAGCAGAAGGGG
CTATTGATGCTTCTAACATTTTAAAGCCATCGCTCGCTCGCGGTGAGTTGCAATGTATCGGTGCGACTACACTCGATGAG
TATCGTAAATATATTGAGAAAGATGCCGCTCTTGAGCGTCGCTTCCAGCCTATTACTGTGGATGAGCCGACAGAAGAAGA
GTCTGTGCAAATTCTACAAGGTCTTCGTGATCGGTATGAGGCACATCATCGTGTGTCTATAACAAACGAAGCCATTGAAG
CAGCCGTGAAATTGTCCAGTCGCTATATTTCCGATCGATTCCTTCCAGACAAAGCGATCGATCTAATTGACGAGGCTGGA
TCGAAAGTGCGACTCAAATCATTTACAACACCACCCAATTTAAAAGAACTAGAAATGAATCTTGGTGAAGTGCGCAAAGA
AAAAGACGCGGCTGTCCAAAGCCAAGAATTTGAGAAGGCGGCTTCGCTTCGTGATACAGAACAACGTCTTCGTGAACAAG
TAGAAGAAACAAAGAAGACATGGAAAGAAAAGCAAGGGAAAGAAAACAGCCAAGTAACTGTTGAGGATATCGCTAGTGTT
GTATCCAGCTGGACGGGTATTCCTGTATCCAAGATCGCTCAAACAGAAACCGACAAGTTGCTAAAATTAGAAGAAACGCT
TCACTCCCGAGTTATCGGACAAAATGAAGCGGTCAGTGCGGTTAGTAAGGCAGTTCGACGTGCGCGTGCTGGTCTAAAAG
ATCCGAAGCGCCCCATCGGTTCGTTTATTTTCTTAGGGCCAACTGGTGTCGGGAAAACTGAGCTGGCTCGTGCGCTAGCG
GAATCGATGTTCGGAGATGAAGACGCGATGATCCGGATCGACATGTCTGAGTTTATGGAGAAACATTCTACGTCTCGTCT
TGTCGGCTCCCCTCCAGGCTATGTCGGTTTTGACGAAGGTGGTCAGTTGACCGAGAAAGTGCGTCGTAAGCCGTATTCGG
TCATTTTGCTAGACGAAGTAGAGAAAGCACATCCAGATGTGTTTAATATTTTGCTTCAAGTACTAGAGGATGGCCGTTTG
ACCGATTCCAAAGGTCGTACGGTTGACTTCCGAAACACGGTACTCATCATGACTTCAAACGTCGGGGCGGAGCAACTGAA
GCGGAACAAGTTTGTCGGCTTTAACGTGCAGGACGAAGGGCAACAGTACAAAGACATGAAGGGGAATGTAATGGAAGAGC
TCAAACGTGCTTTCCGTCCAGAGTTCCTAAACCGTGTCGATGAAATCATTGTCTTCCACGCATTGGAAAAGGCGCAACTG
AAACAAATTGTTTCCTTGCTATCAGATCAATTAACAAAGCGTTTAAGTGAGCAAAACATTAGCTTAACGCTTACTGAAGT
AGCGAAAGACAAAATCGCAGAAGTGGGCTACGATCCAGAGTACGGAGCTAGACCATTACGTCGTGCTCTGCAAAAGCACA
TTGAAGATCGCCTTTCTGAAGAACTTTTGAAAGGGAAAGTGCTGACTGGAACGAACGTCACCGTTGACGTCGAAAAAGGA
GAGTTTATCGTTCGTACGAGTGAAGAGGTTGAGCAAACAACATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.881 |
99.263 |
0.862 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50 |
98.526 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
45.379 |
100 |
0.471 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.346 |
100 |
0.467 |
| clpC | Streptococcus mutans UA159 |
44.619 |
100 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
46 |
98.28 |
0.452 |
| clpC | Streptococcus pneumoniae Rx1 |
46 |
98.28 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.875 |
98.28 |
0.451 |
| clpE | Streptococcus mutans UA159 |
53.182 |
81.081 |
0.431 |
| clpE | Streptococcus pneumoniae R6 |
53.532 |
78.256 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
53.532 |
78.256 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
53.532 |
78.256 |
0.419 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.375 |
78.256 |
0.418 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.269 |
78.501 |
0.41 |