Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | H9K48_RS05735 | Genome accession | NZ_CP064033 |
| Coordinates | 1227281..1227925 (+) | Length | 214 a.a. |
| NCBI ID | WP_005386783.1 | Uniprot ID | Q87NC3 |
| Organism | Vibrio parahaemolyticus strain DLM1805 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1222281..1232925
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9K48_RS05715 (H9K48_05710) | - | 1222578..1222898 (-) | 321 | WP_005465080.1 | HI1450 family dsDNA-mimic protein | - |
| H9K48_RS05720 (H9K48_05715) | yeiP | 1222901..1223467 (-) | 567 | WP_005465079.1 | elongation factor P-like protein YeiP | - |
| H9K48_RS05725 (H9K48_05720) | - | 1223654..1224421 (+) | 768 | WP_025526372.1 | nucleotidyltransferase domain-containing protein | - |
| H9K48_RS05730 (H9K48_05725) | - | 1224418..1226781 (-) | 2364 | WP_025793142.1 | DNA polymerase II | - |
| H9K48_RS05735 (H9K48_05730) | letA | 1227281..1227925 (+) | 645 | WP_005386783.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| H9K48_RS05740 (H9K48_05735) | uvrC | 1227927..1229759 (+) | 1833 | WP_025793143.1 | excinuclease ABC subunit UvrC | Machinery gene |
| H9K48_RS05745 (H9K48_05740) | pgsA | 1229806..1230363 (+) | 558 | WP_005494716.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23765.32 Da Isoelectric Point: 5.6509
>NTDB_id=441230 H9K48_RS05735 WP_005386783.1 1227281..1227925(+) (letA) [Vibrio parahaemolyticus strain DLM1805]
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
Nucleotide
Download Length: 645 bp
>NTDB_id=441230 H9K48_RS05735 WP_005386783.1 1227281..1227925(+) (letA) [Vibrio parahaemolyticus strain DLM1805]
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAGTTCTCACCAGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCGAAGACAGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTTGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAGTTCTCACCAGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCGAAGACAGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTTGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
50.952 |
98.131 |
0.5 |
| letA | Legionella pneumophila strain ERS1305867 |
50.952 |
98.131 |
0.5 |