Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   IOD14_RS02865 Genome accession   NZ_CP063808
Coordinates   601631..602755 (-) Length   374 a.a.
NCBI ID   WP_123990882.1    Uniprot ID   -
Organism   Streptomyces sp. A2-16     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 596631..607755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IOD14_RS02840 (IOD14_02840) cseB 597146..597850 (-) 705 WP_212669575.1 two-component system response regulator CseB -
  IOD14_RS02845 (IOD14_02845) - 597949..598638 (-) 690 WP_123990879.1 hypothetical protein -
  IOD14_RS02850 (IOD14_02850) - 598623..599165 (-) 543 WP_020122536.1 SigE family RNA polymerase sigma factor -
  IOD14_RS02855 (IOD14_02855) - 599401..600336 (-) 936 WP_212669576.1 A/G-specific adenine glycosylase -
  IOD14_RS02860 (IOD14_02860) - 600683..601528 (+) 846 WP_123990881.1 hypothetical protein -
  IOD14_RS02865 (IOD14_02865) disA 601631..602755 (-) 1125 WP_123990882.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  IOD14_RS02870 (IOD14_02870) radA/sms 602837..604246 (-) 1410 WP_123990883.1 DNA repair protein RadA Machinery gene
  IOD14_RS02875 (IOD14_02875) - 604540..606228 (+) 1689 WP_212669577.1 sigma-70 family RNA polymerase sigma factor -
  IOD14_RS02880 (IOD14_02880) - 606692..607447 (-) 756 WP_249126240.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40095.84 Da        Isoelectric Point: 4.9955

>NTDB_id=440840 IOD14_RS02865 WP_123990882.1 601631..602755(-) (disA) [Streptomyces sp. A2-16]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGFDKTVETMCTGGFVLDVEFAATRLR
ELCKLDGGIVLSSDLSKILRAGVQFVPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDQALYELDALTHAELLELPTVARALGYTGSPEAIDSGVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=440840 IOD14_RS02865 WP_123990882.1 601631..602755(-) (disA) [Streptomyces sp. A2-16]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCCCT
GAGCGCCGTGGCCCCCGGTACCGCCCTGCGCGACGGCCTCGAGCGGGTGCTGCGCGGCAACACCGGCGGACTCATCGTGC
TGGGCTTCGACAAGACGGTGGAGACGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCGCGGCCACGCGTCTGCGT
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTCTCGTCCGACCTGTCGAAGATCCTGCGGGCCGGCGTGCAGTTCGTGCC
CGACGCGACGATCCCGACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGCCTCATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTGCGCCTGGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCCGTGGCCCAGCGCCTGGAGATGGTGCGCCGTATCG
CCACGGAGATCGCCGAGTACGTGGTCGAACTCGGCACGGACGGCCGCCTCCTCGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAACTGGTGGTCCGGGACTACGTCCCCGAACCCACCGCGAAGCGCTCCCGCACGGTCGACCA
GGCGCTGTACGAACTGGACGCCCTGACCCACGCCGAGCTCCTCGAACTCCCCACGGTGGCCCGCGCCCTGGGCTACACCG
GCTCCCCCGAGGCGATCGACTCGGGCGTCTCCCCCCGCGGTTTCCGTCTCCTGGCCAAGGTCCCCCGCCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTGCTGGCTGCAAGCGTCGACGACCTGCAGACGGTCGA
CGGGGTGGGCGAGGCCAGGGCGCGGAGCGTCAGGGAGGGCCTGTCGAGGCTGGCGGAGAGCTCCATCCTGGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.513

0.43