Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | HHJ99_RS00180 | Genome accession | NZ_CP051643 |
| Coordinates | 31616..32011 (+) | Length | 131 a.a. |
| NCBI ID | WP_002445557.1 | Uniprot ID | A0A1J3ZZ23 |
| Organism | Staphylococcus caprae strain SY333 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 26616..37011
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ99_RS00150 (HHJ99_00150) | atpD | 26850..28262 (+) | 1413 | WP_002445568.1 | F0F1 ATP synthase subunit beta | - |
| HHJ99_RS00155 (HHJ99_00155) | - | 28282..28686 (+) | 405 | WP_002445567.1 | F0F1 ATP synthase subunit epsilon | - |
| HHJ99_RS00160 (HHJ99_00160) | - | 28836..29069 (+) | 234 | WP_037541859.1 | DUF1146 family protein | - |
| HHJ99_RS00165 (HHJ99_00165) | murA | 29179..30444 (+) | 1266 | WP_044466358.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| HHJ99_RS00170 (HHJ99_00170) | fabZ | 30486..30923 (+) | 438 | WP_002445561.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| HHJ99_RS00175 (HHJ99_00175) | - | 30980..31423 (-) | 444 | WP_037541858.1 | YwpF-like family protein | - |
| HHJ99_RS00180 (HHJ99_00180) | ssb | 31616..32011 (+) | 396 | WP_002445557.1 | single-stranded DNA-binding protein | Machinery gene |
| HHJ99_RS00185 (HHJ99_00185) | - | 32403..33125 (+) | 723 | WP_002445556.1 | transglycosylase family protein | - |
| HHJ99_RS00190 (HHJ99_00190) | tenA | 33424..34113 (+) | 690 | WP_002445555.1 | thiaminase II | - |
| HHJ99_RS00195 (HHJ99_00195) | thiD | 34106..34927 (+) | 822 | WP_037541857.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| HHJ99_RS00200 (HHJ99_00200) | thiM | 34920..35714 (+) | 795 | WP_002445553.1 | hydroxyethylthiazole kinase | - |
| HHJ99_RS00205 (HHJ99_00205) | thiE | 35715..36353 (+) | 639 | WP_002445552.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15128.93 Da Isoelectric Point: 5.0119
>NTDB_id=440190 HHJ99_RS00180 WP_002445557.1 31616..32011(+) (ssb) [Staphylococcus caprae strain SY333]
MLNKIVIVGRLTKDAQIYEKEDSRVATFCVATERNYKDENNEVSSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKSNEIISQNQFDEDTYHSDEFETINI
MLNKIVIVGRLTKDAQIYEKEDSRVATFCVATERNYKDENNEVSSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKSNEIISQNQFDEDTYHSDEFETINI
Nucleotide
Download Length: 396 bp
>NTDB_id=440190 HHJ99_RS00180 WP_002445557.1 31616..32011(+) (ssb) [Staphylococcus caprae strain SY333]
ATGTTAAATAAAATAGTAATTGTTGGTAGGTTAACTAAAGATGCCCAAATATATGAAAAGGAGGATAGTAGAGTTGCAAC
GTTTTGTGTAGCAACAGAAAGAAATTACAAAGACGAAAATAATGAAGTTTCGAGCGACTATTTACTGTGTAAGGCATTTG
GTAAAACAGCTACGAATATTGAAAAATATACCAGTCAAGGTACTTTAGTAGGGATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGGCAAACACATTTTGTAACCGAACTATATGTAGAAACGATTAAATTCATGTCTCCCAAAACAAAAAG
TAACGAAATTATCTCTCAAAATCAATTTGACGAAGACACTTATCACTCAGACGAATTTGAAACTATCAATATATAA
ATGTTAAATAAAATAGTAATTGTTGGTAGGTTAACTAAAGATGCCCAAATATATGAAAAGGAGGATAGTAGAGTTGCAAC
GTTTTGTGTAGCAACAGAAAGAAATTACAAAGACGAAAATAATGAAGTTTCGAGCGACTATTTACTGTGTAAGGCATTTG
GTAAAACAGCTACGAATATTGAAAAATATACCAGTCAAGGTACTTTAGTAGGGATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGGCAAACACATTTTGTAACCGAACTATATGTAGAAACGATTAAATTCATGTCTCCCAAAACAAAAAG
TAACGAAATTATCTCTCAAAATCAATTTGACGAAGACACTTATCACTCAGACGAATTTGAAACTATCAATATATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |