Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HG264_RS14675 Genome accession   NZ_CP051625
Coordinates   3186098..3186514 (+) Length   138 a.a.
NCBI ID   WP_150302081.1    Uniprot ID   A0A6C0TNR1
Organism   Pseudomonas sp. gcc21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3181098..3191514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HG264_RS14645 (HG264_14640) - 3181307..3182302 (-) 996 WP_169408321.1 aspartate carbamoyltransferase catalytic subunit -
  HG264_RS14650 (HG264_14645) pyrR 3182311..3182817 (-) 507 WP_169408322.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HG264_RS14655 (HG264_14650) ruvX 3182814..3183251 (-) 438 WP_169408323.1 Holliday junction resolvase RuvX -
  HG264_RS14660 (HG264_14655) - 3183251..3183820 (-) 570 WP_169408324.1 YqgE/AlgH family protein -
  HG264_RS14665 (HG264_14660) - 3183917..3184816 (-) 900 WP_169408325.1 energy transducer TonB -
  HG264_RS14670 (HG264_14665) gshB 3184918..3185880 (-) 963 WP_169408326.1 glutathione synthase -
  HG264_RS14675 (HG264_14670) pilG 3186098..3186514 (+) 417 WP_150302081.1 twitching motility response regulator PilG Regulator
  HG264_RS14680 (HG264_14675) pilH 3186551..3186916 (+) 366 WP_169408327.1 twitching motility response regulator PilH -
  HG264_RS14685 (HG264_14680) - 3186969..3187505 (+) 537 WP_169408328.1 chemotaxis protein CheW -
  HG264_RS14690 (HG264_14685) - 3187590..3189629 (+) 2040 WP_169409158.1 methyl-accepting chemotaxis protein -
  HG264_RS14695 (HG264_14690) - 3189722..3190564 (+) 843 WP_372240245.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15028.43 Da        Isoelectric Point: 7.8542

>NTDB_id=439950 HG264_RS14675 WP_150302081.1 3186098..3186514(+) (pilG) [Pseudomonas sp. gcc21]
MEENFESLKVMVIDDSKTIRRTAETLLKKVGCTVITAVDGFDALAKIADNHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
ATPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPQTQNKVAGAAGA

Nucleotide


Download         Length: 417 bp        

>NTDB_id=439950 HG264_RS14675 WP_150302081.1 3186098..3186514(+) (pilG) [Pseudomonas sp. gcc21]
ATGGAAGAAAATTTCGAGAGCCTGAAGGTCATGGTCATCGATGACAGCAAGACCATTCGACGGACGGCAGAAACGCTGCT
GAAAAAAGTCGGATGCACTGTCATCACTGCGGTGGACGGCTTCGACGCCCTGGCCAAGATTGCTGACAATCACCCCGATA
TCATTTTTGTCGACATCATGATGCCGCGTCTCGACGGCTATCAGACCTGCGCGCTAATCAAGAACAACAGCGCCTTCCGT
GCAACCCCGGTAATCATGCTGTCCAGCAAGGACGGCCTGTTTGACAAGGCAAAGGGTCGCATCGTGGGCTCTGATCAATA
TCTTACCAAGCCCTTCAGCAAGGAAGAGCTTCTCGGCGCGATCCGCGCCCATGTTCCGCAAACTCAAAACAAAGTAGCCG
GTGCTGCCGGGGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6C0TNR1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

90.58

0.71
  vicR Streptococcus mutans UA159

42.188

92.754

0.391