Detailed information NTG0043978

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: YYK_RS04135
• Genome accession: NC_018526
• Coordinates: 839573..840643 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis S735
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 834573..845643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YYK_RS04110 (YYK_03870)	-	835684..836352 (+)	669	WP_011922395.1	SatD family protein	-
YYK_RS04115 (YYK_03875)	-	836356..837096 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
YYK_RS04120 (YYK_03880)	-	837161..837598 (+)	438	WP_011922397.1	AAA family ATPase	-
YYK_RS10390 (YYK_03885)	-	838251..838493 (+)	243	WP_014917242.1	Abortive infection bacteriophage resistance related protein	-
YYK_RS04130 (YYK_03890)	-	838498..839214 (+)	717	WP_014917243.1	Abi family protein	-
YYK_RS04135 (YYK_03895)	xerS	839573..840643 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
YYK_RS04140 (YYK_03900)	-	840713..842221 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
YYK_RS04145 (YYK_03905)	-	842297..843238 (-)	942	WP_012775102.1	sensor histidine kinase	-
YYK_RS04150 (YYK_03910)	braR	843235..843900 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
YYK_RS04155 (YYK_03915)	-	843939..844196 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE family toxin	-
YYK_RS04160 (YYK_03920)	relB	844180..844431 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=43978 YYK_RS04135 WP_012775101.1 839573..840643(+) (xerS) [Streptococcus suis S735]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=43978 YYK_RS04135 WP_012775101.1 839573..840643(+) (xerS) [Streptococcus suis S735]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831