Detailed information NTG0439394

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG557_RS01600
• Genome accession: NZ_CP051510
• Coordinates: 330236..331036 (+)
• Length: 266 a.a.
• NCBI ID: WP_202133080.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-008
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 325236..336036

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG557_RS01565 (HG557_01565)	pseH	325737..326279 (+)	543	WP_202166157.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG557_RS01570 (HG557_01570)	-	326212..327150 (-)	939	WP_202166158.1	tetraacyldisaccharide 4'-kinase	-
HG557_RS01575 (HG557_01575)	-	327147..327929 (-)	783	WP_202166159.1	NAD+ synthase	-
HG557_RS01585 (HG557_01585)	ilvC	328177..329169 (+)	993	WP_202166160.1	ketol-acid reductoisomerase	-
HG557_RS01590 (HG557_01590)	minD	329188..329994 (+)	807	WP_202133079.1	septum site-determining protein MinD	-
HG557_RS01595 (HG557_01595)	minE	329991..330224 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HG557_RS01600 (HG557_01600)	dprA	330236..331036 (+)	801	WP_202133080.1	DNA-processing protein DprA	Machinery gene
HG557_RS01605 (HG557_01605)	dprB	331033..331437 (+)	405	WP_202133081.1	Holliday junction resolvase RuvX	Machinery gene
HG557_RS01610 (HG557_01610)	-	331565..332245 (+)	681	WP_202148237.1	tetratricopeptide repeat protein	-
HG557_RS01615 (HG557_01615)	-	332441..332779 (+)	339	WP_202135745.1	hypothetical protein	-
HG557_RS01620 (HG557_01620)	-	332763..333329 (+)	567	WP_202166161.1	hypothetical protein	-
HG557_RS01625 (HG557_01625)	-	333341..333589 (+)	249	WP_237393354.1	lysozyme	-
HG557_RS07805	-	333595..333930 (+)	336	WP_237393487.1	hypothetical protein	-
HG557_RS07810 (HG557_01635)	-	334016..334201 (+)	186	WP_014534380.1	hypothetical protein	-
HG557_RS01640 (HG557_01640)	-	334355..334741 (+)	387	WP_202133397.1	DUF1294 domain-containing protein	-
HG557_RS01645 (HG557_01645)	-	334741..335526 (+)	786	WP_202135746.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29816.72 Da
• Isoelectric Point: 8.5925

>NTDB_id=439394 HG557_RS01600 WP_202133080.1 330236..331036(+) (dprA) [Helicobacter pylori strain ASHA-008]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439394 HG557_RS01600 WP_202133080.1 330236..331036(+) (dprA) [Helicobacter pylori strain ASHA-008]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAACATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41