Detailed information NTG0439180

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG567_RS01585
• Genome accession: NZ_CP051500
• Coordinates: 331832..332632 (+)
• Length: 266 a.a.
• NCBI ID: WP_202163875.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-003
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 326832..337632

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG567_RS01550 (HG567_01550)	pseH	327333..327875 (+)	543	WP_202138217.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG567_RS01555 (HG567_01555)	-	327808..328746 (-)	939	WP_202138218.1	tetraacyldisaccharide 4'-kinase	-
HG567_RS01560 (HG567_01560)	-	328733..329524 (-)	792	WP_202139922.1	NAD+ synthase	-
HG567_RS01570 (HG567_01570)	ilvC	329773..330765 (+)	993	WP_202139923.1	ketol-acid reductoisomerase	-
HG567_RS01575 (HG567_01575)	minD	330789..331595 (+)	807	WP_001019051.1	septum site-determining protein MinD	-
HG567_RS01580 (HG567_01580)	minE	331592..331825 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HG567_RS01585 (HG567_01585)	dprA	331832..332632 (+)	801	WP_202163875.1	DNA-processing protein DprA	Machinery gene
HG567_RS01590 (HG567_01590)	dprB	332629..333033 (+)	405	WP_202139925.1	Holliday junction resolvase RuvX	Machinery gene
HG567_RS01595 (HG567_01595)	-	333156..333506 (+)	351	WP_202139926.1	tetratricopeptide repeat protein	-
HG567_RS01600 (HG567_01600)	-	333693..334031 (+)	339	WP_128004067.1	hypothetical protein	-
HG567_RS01605 (HG567_01605)	-	334015..334617 (+)	603	WP_202139927.1	hypothetical protein	-
HG567_RS01610 (HG567_01610)	-	334686..335567 (-)	882	WP_202163876.1	RluA family pseudouridine synthase	-
HG567_RS01615 (HG567_01615)	recJ	335567..337117 (-)	1551	WP_202163877.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29904.82 Da
• Isoelectric Point: 7.8890

>NTDB_id=439180 HG567_RS01585 WP_202163875.1 331832..332632(+) (dprA) [Helicobacter pylori strain PUNO-003]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIVQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439180 HG567_RS01585 WP_202163875.1 331832..332632(+) (dprA) [Helicobacter pylori strain PUNO-003]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGTGCAAAACGGCTTGATTTTAAGCGAATACGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCCTGAATGAAAGCGATGG
CACTAATGAACTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAATACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTTTGCGAAAAACCCCAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41