Detailed information NTG0438934

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: HGO96_RS13565
• Genome accession: NZ_CP051484
• Coordinates: 2781668..2782138 (+)
• Length: 156 a.a.
• NCBI ID: WP_000934770.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain NGA71
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2776668..2787138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGO96_RS13530 (HGO96_03155)	-	2776992..2777312 (+)	321	WP_001120197.1	DUF771 domain-containing protein	-
HGO96_RS13535 (HGO96_03160)	-	2777309..2777470 (+)	162	WP_000066020.1	DUF1270 domain-containing protein	-
HGO96_RS13540 (HGO96_03165)	-	2777563..2777823 (+)	261	WP_000291489.1	DUF1108 family protein	-
HGO96_RS13545 (HGO96_03170)	-	2777832..2778095 (+)	264	WP_001205732.1	hypothetical protein	-
HGO96_RS13550 (HGO96_03175)	-	2778104..2780047 (+)	1944	WP_000700562.1	AAA family ATPase	-
HGO96_RS13555 (HGO96_03180)	-	2780049..2780969 (+)	921	WP_031764964.1	recombinase RecT	-
HGO96_RS13560 (HGO96_03185)	-	2781050..2781667 (+)	618	WP_071621397.1	MBL fold metallo-hydrolase	-
HGO96_RS13565 (HGO96_03190)	ssbA	2781668..2782138 (+)	471	WP_000934770.1	single-stranded DNA-binding protein	Machinery gene
HGO96_RS13570 (HGO96_03195)	-	2782168..2783052 (+)	885	WP_000148301.1	DnaD domain protein	-
HGO96_RS13575 (HGO96_03200)	-	2783059..2783277 (+)	219	WP_000338528.1	hypothetical protein	-
HGO96_RS13580 (HGO96_03205)	-	2783286..2783690 (+)	405	WP_000401964.1	RusA family crossover junction endodeoxyribonuclease	-
HGO96_RS13585 (HGO96_03210)	-	2783703..2784071 (+)	369	WP_000101274.1	SA1788 family PVL leukocidin-associated protein	-
HGO96_RS13590 (HGO96_03215)	-	2784075..2784317 (+)	243	WP_000131366.1	SAV1978 family virulence-associated passenger protein	-
HGO96_RS13595 (HGO96_03220)	-	2784382..2784831 (+)	450	WP_000982711.1	YopX family protein	-
HGO96_RS13600 (HGO96_03225)	-	2784828..2785337 (+)	510	WP_001105598.1	hypothetical protein	-
HGO96_RS13605 (HGO96_03230)	-	2785334..2785744 (+)	411	WP_000197968.1	hypothetical protein	-
HGO96_RS13610 (HGO96_13815)	-	2785737..2785862 (+)	126	Protein_2640	DUF1024 family protein	-
HGO96_RS13615 (HGO96_03240)	-	2786218..2786754 (+)	537	WP_001066444.1	dUTPase	-
HGO96_RS13620 (HGO96_03245)	-	2786791..2786997 (+)	207	WP_000195820.1	DUF1381 domain-containing protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17713.63 Da
• Isoelectric Point: 5.2672

>NTDB_id=438934 HGO96_RS13565 WP_000934770.1 2781668..2782138(+) (ssbA) [Staphylococcus aureus strain NGA71]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=438934 HGO96_RS13565 WP_000934770.1 2781668..2782138(+) (ssbA) [Staphylococcus aureus strain NGA71]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.367	100	0.628
ssb	Latilactobacillus sakei subsp. sakei 23K	50.588	100	0.551
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	67.949	0.404
ssb	Glaesserella parasuis strain SC1401	32.203	100	0.365