Detailed information NTG0438686

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: HC658_RS19020
• Genome accession: NZ_CP051466
• Coordinates: 3688087..3689232 (+)
• Length: 381 a.a.
• NCBI ID: WP_168768968.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain UCMB5021
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3683087..3694232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HC658_RS18995 (HC658_37370)	albF	3683103..3684383 (+)	1281	WP_032722698.1	pitrilysin family protein	-
HC658_RS19000 (HC658_37380)	albG	3684380..3685081 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
HC658_RS19005 (HC658_37390)	ywhL	3685087..3686463 (-)	1377	WP_089172684.1	YncE family protein	-
HC658_RS19010 (HC658_37400)	ywhK	3686502..3687857 (-)	1356	WP_032722703.1	YncE family protein	-
HC658_RS21195	-	3687854..3688084 (-)	231	WP_009968328.1	hypothetical protein	-
HC658_RS19020 (HC658_37410)	rapF	3688087..3689232 (+)	1146	WP_168768968.1	response regulator aspartate phosphatase RapF	Regulator
HC658_RS19025 (HC658_37420)	phrF	3689216..3689335 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
HC658_RS19030	-	3689449..3689899 (+)	451	Protein_3706	YbaK/EbsC family protein	-
HC658_RS19035 (HC658_37430)	speB	3689931..3690803 (-)	873	WP_032722706.1	agmatinase	-
HC658_RS19040 (HC658_37440)	speE	3690864..3691694 (-)	831	WP_003227543.1	spermidine synthase	-
HC658_RS19045 (HC658_37450)	pbpG	3691896..3693971 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45610.07 Da
• Isoelectric Point: 5.0649

>NTDB_id=438686 HC658_RS19020 WP_168768968.1 3688087..3689232(+) (rapF) [Bacillus subtilis subsp. subtilis strain UCMB5021]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYDIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=438686 HC658_RS19020 WP_168768968.1 3688087..3689232(+) (rapF) [Bacillus subtilis subsp. subtilis strain UCMB5021]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACGATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57