Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HC658_RS02190 Genome accession   NZ_CP051466
Coordinates   432050..433000 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis subsp. subtilis strain UCMB5021     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 427050..438000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC658_RS02165 (HC658_04260) rapC 428510..429658 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  HC658_RS02170 (HC658_04270) phrC 429642..429764 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  HC658_RS02175 yczM 429864..429953 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  HC658_RS02180 yczN 430035..430148 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  HC658_RS02185 (HC658_04280) thrD 430301..431665 (-) 1365 WP_015715246.1 aspartate kinase -
  HC658_RS02190 (HC658_04290) ceuB 432050..433000 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  HC658_RS02195 (HC658_04300) yclO 432993..433940 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  HC658_RS02200 (HC658_04310) yclP 433934..434692 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  HC658_RS02205 (HC658_04320) yclQ 434714..435667 (+) 954 WP_015715247.1 petrobactin ABC transporter substrate-binding protein YclQ -
  HC658_RS02210 (HC658_04330) cdaE 435714..437132 (-) 1419 WP_015715248.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=438619 HC658_RS02190 WP_014475804.1 432050..433000(+) (ceuB) [Bacillus subtilis subsp. subtilis strain UCMB5021]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=438619 HC658_RS02190 WP_014475804.1 432050..433000(+) (ceuB) [Bacillus subtilis subsp. subtilis strain UCMB5021]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGATACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTGATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525